1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01013420001

GSVIVT01013420001


Description : Protein degradation.peptidase families.cysteine-type peptidase activities.papain-type protease


Gene families : OG0000108 (Archaeplastida) Phylogenetic Tree(s): OG0000108_tree ,
OG_05_0000044 (LandPlants) Phylogenetic Tree(s): OG_05_0000044_tree ,
OG_06_0003937 (SeedPlants) Phylogenetic Tree(s): OG_06_0003937_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013420001
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00165270 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.07 Archaeplastida
AMTR_s00022p00166050 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.08 Archaeplastida
AMTR_s00374p00005120 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.05 Archaeplastida
AT1G06260 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT1G20850 XCP2 xylem cysteine peptidase 2 0.03 Archaeplastida
AT4G35350 XCP1 xylem cysteine peptidase 1 0.03 Archaeplastida
AT5G45890 SAG12 senescence-associated gene 12 0.03 Archaeplastida
GSVIVT01020657001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_10444 No alias protease (Papain) 0.02 Archaeplastida
Gb_19399 No alias Prgrammed Cell Death cysteine protease (XCP) 0.07 Archaeplastida
LOC_Os01g73980.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.02 Archaeplastida
LOC_Os04g12660.1 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.02 Archaeplastida
LOC_Os04g55650.1 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
LOC_Os09g32230.1 No alias Senescence-specific cysteine protease SAG12... 0.02 Archaeplastida
LOC_Os09g38920.1 No alias Senescence-specific cysteine protease SAG12... 0.05 Archaeplastida
MA_10425982g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_10429635g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10433090g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_247624g0010 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_34759g0010 No alias Thiol protease SEN102 OS=Hemerocallis sp.... 0.06 Archaeplastida
Mp1g01840.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.06 Archaeplastida
Mp6g12320.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.05 Archaeplastida
Mp8g12950.1 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c19_6730V3.1 No alias Granulin repeat cysteine protease family protein 0.03 Archaeplastida
Smo98707 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc04g082710.4.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.06 Archaeplastida
Solyc12g094700.3.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.05 Archaeplastida
Zm00001e003949_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e021469_P001 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 Archaeplastida
Zm00001e028260_P001 No alias Cysteine protease XCP2 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Zm00001e029667_P001 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.08 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001510 RNA methylation IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016426 tRNA (adenine) methyltransferase activity IEP Neighborhood
MF GO:0016429 tRNA (adenine-N1-)-methyltransferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0030488 tRNA methylation IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
CC GO:0034708 methyltransferase complex IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0043527 tRNA methyltransferase complex IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013201 Prot_inhib_I29 1 53
IPR000668 Peptidase_C1A_C 82 297
No external refs found!