1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01013506001

GSVIVT01013506001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.FBX component


Gene families : OG0002521 (Archaeplastida) Phylogenetic Tree(s): OG0002521_tree ,
OG_05_0001663 (LandPlants) Phylogenetic Tree(s): OG_05_0001663_tree ,
OG_06_0000949 (SeedPlants) Phylogenetic Tree(s): OG_06_0000949_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013506001
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
Solyc01g067010.3.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.03 Archaeplastida
Solyc10g008450.2.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g075010.2.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc12g098170.1.1 No alias component FBX of SCF E3 ubiquitin ligase complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 222 316
IPR001810 F-box_dom 24 56
No external refs found!