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  5. AMTR_s00038p00206970

AMTR_s00038p00206970 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00038.160

Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.AOD group histone demethylase activities.LDL/KDM1 lysine-specific demethylase


Gene families : OG0001739 (Archaeplastida) Phylogenetic Tree(s): OG0001739_tree ,
OG_05_0001723 (LandPlants) Phylogenetic Tree(s): OG_05_0001723_tree ,
OG_06_0001595 (SeedPlants) Phylogenetic Tree(s): OG_06_0001595_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00038p00206970
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Pp3c14_17210V3.1 No alias Flavin containing amine oxidoreductase family protein 0.02 Archaeplastida
Solyc07g063450.3.1 No alias lysine-specific demethylase (LDL/KDM1) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004334 fumarylacetoacetase activity IEP Neighborhood
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Neighborhood
MF GO:0004348 glucosylceramidase activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0007155 cell adhesion IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009668 plastid membrane organization IEP Neighborhood
BP GO:0010027 thylakoid membrane organization IEP Neighborhood
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Neighborhood
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0022610 biological adhesion IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
InterPro domains Description Start Stop
IPR007526 SWIRM 112 195
IPR002937 Amino_oxidase 221 646
No external refs found!