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  5. GSVIVT01013684001

GSVIVT01013684001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000498 (LandPlants) Phylogenetic Tree(s): OG_05_0000498_tree ,
OG_06_0005097 (SeedPlants) Phylogenetic Tree(s): OG_06_0005097_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013684001
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AT2G38090 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G10590 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G36570 ATRL3, RL3 RAD-like 3 0.04 Archaeplastida
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
GSVIVT01013871001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
LOC_Os01g04930.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os02g47744.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os05g50350.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os05g51160.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_10432538g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_41041g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_413315g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_41803g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_867875g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_957399g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc02g082390.1.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc04g008870.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc06g034030.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc12g089170.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e025783_P002 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e027835_P005 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e031738_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e032519_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004506 squalene monooxygenase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016840 carbon-nitrogen lyase activity IEP Neighborhood
MF GO:0016843 amine-lyase activity IEP Neighborhood
MF GO:0016844 strictosidine synthase activity IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 79 122
No external refs found!