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  5. GSVIVT01013735001

GSVIVT01013735001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000002 (LandPlants) Phylogenetic Tree(s): OG_05_0000002_tree ,
OG_06_0015203 (SeedPlants) Phylogenetic Tree(s): OG_06_0015203_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013735001
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00010p00252990 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00010p00264600 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00024p00137930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.09 Archaeplastida
AMTR_s00030p00146410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00032p00057800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00032p00221670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
AMTR_s00044p00189590 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G26780 AtMYB117, LOF1, MYB117 myb domain protein 117 0.1 Archaeplastida
AT1G34670 AtMYB93, MYB93 myb domain protein 93 0.03 Archaeplastida
AT2G36890 ATMYB38, MYB38,... Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G01140 MYB106, NOK, AtMYB106 myb domain protein 106 0.03 Archaeplastida
AT3G12720 ATY53, ATMYB67, MYB67 myb domain protein 67 0.03 Archaeplastida
AT3G13890 MYB26, ATMYB26, MS35 myb domain protein 26 0.05 Archaeplastida
AT3G29020 MYB110, AtMYB110 myb domain protein 110 0.03 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 Archaeplastida
AT3G61250 AtMYB17, MYB17 myb domain protein 17 0.04 Archaeplastida
AT5G10280 ATMYB64, ATMYB92, MYB92 myb domain protein 92 0.03 Archaeplastida
AT5G52600 AtMYB82, MYB82 myb domain protein 82 0.05 Archaeplastida
AT5G65790 MYB68, ATMYB68 myb domain protein 68 0.03 Archaeplastida
GSVIVT01010086001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01012447001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016768001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01016800001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01019410001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01019967001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01028235001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01029145001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01031341001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01034041001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01035463001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
Gb_29933 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_36145 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_40629 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g09590.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g65370.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os01g74590.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os04g42950.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g50770.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os07g31470.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os07g37210.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os08g37970.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os09g24800.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_117992g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_173523g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_190973g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_24271g0020 No alias transcription factor (MYB) 0.05 Archaeplastida
MA_322432g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_66255g0010 No alias transcription factor (MYB) 0.07 Archaeplastida
Pp3c12_10360V3.1 No alias myb domain protein 105 0.05 Archaeplastida
Pp3c26_1390V3.1 No alias myb domain protein 55 0.05 Archaeplastida
Smo80553 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
Solyc01g005660.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc01g010910.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc01g079620.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g087130.4.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc01g094360.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g082040.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g056310.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc04g074170.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc04g079360.1.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g009230.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g051550.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc05g055030.2.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc06g005310.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc06g005330.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g005870.2.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Solyc08g076700.1.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g081500.3.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc08g082890.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Solyc09g090130.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc11g069030.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc12g049350.2.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e015125_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.08 Archaeplastida
Zm00001e016583_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e019501_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e020004_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e024606_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e025724_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e032347_P001 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e034214_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e035025_P001 No alias transcription factor (MYB) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 63 107
IPR001005 SANT/Myb 9 56
No external refs found!