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  5. GSVIVT01013770001

GSVIVT01013770001


Description : RNA processing.organelle machineries.RNA splicing.plastidial RNA splicing.group-II intron splicing.CRS2-CAF splicing factor complexes.CAF component


Gene families : OG0001098 (Archaeplastida) Phylogenetic Tree(s): OG0001098_tree ,
OG_05_0001090 (LandPlants) Phylogenetic Tree(s): OG_05_0001090_tree ,
OG_06_0003176 (SeedPlants) Phylogenetic Tree(s): OG_06_0003176_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013770001
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
Gb_32774 No alias CRS2-associated factor 2, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g018240.4.1 No alias component CAF of CRS2-CAF plastidial RNA splicing factor... 0.03 Archaeplastida
Solyc11g066300.3.1 No alias component CAF of CRS2-CAF plastidial RNA splicing factor... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR001890 RNA-binding_CRM 196 279
IPR001890 RNA-binding_CRM 314 397
No external refs found!