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  5. GSVIVT01013934001

GSVIVT01013934001


Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.ERF-type transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0004644 (SeedPlants) Phylogenetic Tree(s): OG_06_0004644_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01013934001
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00003p00135920 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00009p00268560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00010p00098700 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00010p00099690 evm_27.TU.AmTr_v1... Ethylene-responsive transcription factor ERF110... 0.04 Archaeplastida
AMTR_s00010p00194910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00025p00249140 evm_27.TU.AmTr_v1... Cell wall.cutin and suberin.biosynthesis... 0.03 Archaeplastida
AMTR_s00040p00195730 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00040p00196580 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00069p00141520 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00077p00141890 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00111p00113030 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.07 Archaeplastida
AMTR_s00115p00032780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00150p00091360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.03 Archaeplastida
AT1G12610 DDF1 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G12890 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT1G22810 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT1G28370 ATERF11, ERF11 ERF domain protein 11 0.07 Archaeplastida
AT1G33760 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT1G43160 RAP2.6 related to AP2 6 0.04 Archaeplastida
AT1G44830 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G77640 No alias Integrase-type DNA-binding superfamily protein 0.06 Archaeplastida
AT2G31230 ATERF15, ERF15 ethylene-responsive element binding factor 15 0.03 Archaeplastida
AT2G36450 HRD Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT3G16280 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT3G23220 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT3G23230 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.03 Archaeplastida
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT4G13620 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.09 Archaeplastida
AT4G34410 RRTF1 redox responsive transcription factor 1 0.06 Archaeplastida
AT5G13330 Rap2.6L related to AP2 6l 0.03 Archaeplastida
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G51190 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT5G51990 CBF4, DREB1D C-repeat-binding factor 4 0.03 Archaeplastida
AT5G61600 ERF104 ethylene response factor 104 0.07 Archaeplastida
Cre16.g649433 No alias No description available 0.02 Archaeplastida
GSVIVT01001089001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01019519001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01028314001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01033416001 No alias External stimuli response.biotic... 0.06 Archaeplastida
GSVIVT01036388001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01036389001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.06 Archaeplastida
Gb_03782 No alias transcription factor (ERF) 0.05 Archaeplastida
Gb_03783 No alias transcription factor (ERF) 0.04 Archaeplastida
Gb_07475 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_07992 No alias Ethylene-responsive transcription factor RAP2-9... 0.04 Archaeplastida
Gb_08031 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_08437 No alias transcription factor (ERF) 0.04 Archaeplastida
Gb_11793 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_12583 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_16683 No alias transcription factor (ERF) 0.05 Archaeplastida
Gb_23321 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_24321 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_24328 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_26067 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_26662 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_26667 No alias transcription factor (ERF) 0.08 Archaeplastida
Gb_26856 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_26857 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_26858 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_34846 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_36992 No alias transcription factor (DREB) 0.06 Archaeplastida
Gb_41020 No alias transcription factor (DREB) 0.04 Archaeplastida
Gb_41444 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_41836 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os01g73770.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os02g32140.1 No alias transcription factor (ERF) 0.04 Archaeplastida
LOC_Os02g43790.1 No alias transcription factor (ERF) 0.05 Archaeplastida
LOC_Os02g45450.1 No alias Dehydration-responsive element-binding protein 1G... 0.05 Archaeplastida
LOC_Os02g52670.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os03g22170.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g32620.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g44670.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g46410.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g48350.1 No alias Dehydration-responsive element-binding protein 1E... 0.06 Archaeplastida
LOC_Os04g57340.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os06g10780.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os06g11940.1 No alias Ethylene-responsive transcription factor ERF017... 0.04 Archaeplastida
LOC_Os08g07700.1 No alias Ethylene-responsive transcription factor ERF087... 0.02 Archaeplastida
LOC_Os08g36920.1 No alias transcription factor (ERF) 0.06 Archaeplastida
LOC_Os09g28440.1 No alias transcription factor (ERF) 0.06 Archaeplastida
LOC_Os09g39810.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os10g41330.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os11g06770.2 No alias transcription factor (ERF) 0.05 Archaeplastida
LOC_Os11g13840.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os12g39330.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.04 Archaeplastida
MA_100577g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_100724g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10082062g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10242823g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_10370681g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_1037g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10430850g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10433310g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10434101g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10434489g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_10436654g0010 No alias Ethylene-responsive transcription factor ERF018... 0.02 Archaeplastida
MA_12171g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_135279g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_17001g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_184464g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_203191g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_214063g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_269802g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_279315g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_288689g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_4032g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_4182g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_420358g0010 No alias Ethylene-responsive transcription factor 1A... 0.03 Archaeplastida
MA_426919g0020 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_428433g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_5530g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_6305g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_65985g0010 No alias transcription factor (ERF) 0.04 Archaeplastida
MA_7166g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_7168929g0010 No alias Ethylene-responsive transcription factor ERF016... 0.02 Archaeplastida
MA_78784g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_81029g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_8574268g0010 No alias transcription factor (DREB) 0.05 Archaeplastida
MA_914123g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_924346g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
MA_9565555g0010 No alias Ethylene-responsive transcription factor ERF016... 0.04 Archaeplastida
MA_959784g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_9785986g0010 No alias transcription factor (DREB) 0.04 Archaeplastida
Mp1g20040.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Mp4g17430.1 No alias Ethylene-responsive transcription factor ERF112... 0.02 Archaeplastida
Mp5g02590.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Mp5g22160.1 No alias Ethylene-responsive transcription factor ERF112... 0.02 Archaeplastida
Mp7g09350.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Mp7g17020.1 No alias Dehydration-responsive element-binding protein 2C... 0.02 Archaeplastida
Pp3c11_23290V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c11_24520V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c16_13260V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c16_13280V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c1_5010V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c23_21450V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c27_6030V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c4_2530V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c6_16660V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c6_19350V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c6_28290V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c9_2020V3.1 No alias erf domain protein 9 0.02 Archaeplastida
Solyc01g009440.3.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc01g057080.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc01g108240.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc02g077370.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc02g090800.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g005500.1.1 No alias transcription factor (ERF). transcription factor (DREB) 0.03 Archaeplastida
Solyc03g005510.2.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc03g026280.3.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.03 Archaeplastida
Solyc03g093540.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc03g093550.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc03g093560.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g114440.1.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.02 Archaeplastida
Solyc03g118190.4.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc03g124110.2.1 No alias transcription factor (DREB). transcription factor (CBF/DREB1) 0.06 Archaeplastida
Solyc04g014530.1.1 No alias transcription factor (ERF) 0.06 Archaeplastida
Solyc04g051360.3.1 No alias transcription factor (ERF) 0.09 Archaeplastida
Solyc05g050790.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc05g052040.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc06g035700.1.1 No alias transcription factor (DREB) 0.05 Archaeplastida
Solyc06g068360.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g082590.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc07g053740.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g078190.2.1 No alias transcription factor (ERF) 0.06 Archaeplastida
Solyc10g006130.1.1 No alias transcription factor (ERF) 0.07 Archaeplastida
Solyc10g009110.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc10g050960.3.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc11g042560.1.1 No alias transcription factor (DREB) 0.07 Archaeplastida
Solyc12g009240.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc12g042210.2.1 No alias transcription factor (ERF) 0.08 Archaeplastida
Zm00001e000400_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e003800_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e006604_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e006753_P003 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e006982_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e007205_P001 No alias Dehydration-responsive element-binding protein 1E... 0.03 Archaeplastida
Zm00001e009947_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e013685_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015312_P001 No alias transcription factor (ERF) 0.05 Archaeplastida
Zm00001e015429_P001 No alias transcription factor (DREB) 0.05 Archaeplastida
Zm00001e019567_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e021331_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e021579_P001 No alias Pathogenesis-related genes transcriptional activator... 0.04 Archaeplastida
Zm00001e023224_P001 No alias transcription factor (DREB) 0.06 Archaeplastida
Zm00001e023816_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e024669_P001 No alias transcription factor (ERF) 0.04 Archaeplastida
Zm00001e025840_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e027351_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e028920_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e032033_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e033072_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.04 Archaeplastida
Zm00001e033537_P001 No alias transcription factor (ERF) 0.06 Archaeplastida
Zm00001e034741_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.04 Archaeplastida
Zm00001e036130_P001 No alias transcription factor (DREB) 0.02 Archaeplastida
Zm00001e037241_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e037869_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e040033_P001 No alias No annotation 0.03 Archaeplastida
Zm00001e041620_P002 No alias transcription factor (ERF) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0045893 positive regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051254 positive regulation of RNA metabolic process IEP Neighborhood
BP GO:1902680 positive regulation of RNA biosynthetic process IEP Neighborhood
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 257 286
IPR001471 AP2/ERF_dom 448 498
IPR001471 AP2/ERF_dom 180 230
No external refs found!