Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL15 component
Gene families : OG0002310 (Archaeplastida) Phylogenetic Tree(s): OG0002310_tree ,
OG_05_0002154 (LandPlants) Phylogenetic Tree(s): OG_05_0002154_tree ,
OG_06_0002413 (SeedPlants) Phylogenetic Tree(s): OG_06_0002413_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01014039001 | |
Cluster | HCCA: Cluster_60 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00111p00023340 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.11 | Archaeplastida | |
AT4G16720 | No alias | Ribosomal protein L23/L15e family protein | 0.13 | Archaeplastida | |
AT4G17390 | No alias | Ribosomal protein L23/L15e family protein | 0.23 | Archaeplastida | |
Cpa|evm.model.tig00000310.75 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.15 | Archaeplastida | |
Cre02.g091100 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | Archaeplastida | |
Gb_32917 | No alias | component RPL15 of LSU proteome component | 0.04 | Archaeplastida | |
Gb_36986 | No alias | component RPL15 of LSU proteome component | 0.13 | Archaeplastida | |
LOC_Os03g40180.1 | No alias | component RPL15 of LSU proteome component | 0.18 | Archaeplastida | |
LOC_Os05g19370.1 | No alias | component RPL15 of LSU proteome component | 0.23 | Archaeplastida | |
MA_29804g0010 | No alias | component RPL15 of LSU proteome component | 0.11 | Archaeplastida | |
Mp1g06500.1 | No alias | component RPL15 of LSU proteome component | 0.21 | Archaeplastida | |
Pp3c14_22920V3.1 | No alias | Ribosomal protein L23/L15e family protein | 0.25 | Archaeplastida | |
Pp3c17_22180V3.1 | No alias | Ribosomal protein L23/L15e family protein | 0.15 | Archaeplastida | |
Pp3c1_37420V3.1 | No alias | Ribosomal protein L23/L15e family protein | 0.17 | Archaeplastida | |
Pp3c20_2640V3.1 | No alias | Ribosomal protein L23/L15e family protein | 0.16 | Archaeplastida | |
Pp3c2_5780V3.1 | No alias | Ribosomal protein L23/L15e family protein | 0.13 | Archaeplastida | |
Pp3c8_22360V3.1 | No alias | Ribosomal protein L23/L15e family protein | 0.18 | Archaeplastida | |
Smo270259 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | Archaeplastida | |
Solyc04g008460.4.1 | No alias | component RPL15 of LSU proteome component | 0.17 | Archaeplastida | |
Solyc06g060400.3.1 | No alias | component RPL15 of LSU proteome component | 0.21 | Archaeplastida | |
Solyc06g064630.3.1 | No alias | component RPL15 of LSU proteome component | 0.21 | Archaeplastida | |
Zm00001e010380_P001 | No alias | component RPL15 of LSU proteome component | 0.23 | Archaeplastida | |
Zm00001e032897_P001 | No alias | component RPL15 of LSU proteome component | 0.23 | Archaeplastida | |
Zm00001e034995_P001 | No alias | component RPL15 of LSU proteome component | 0.24 | Archaeplastida | |
Zm00001e034996_P001 | No alias | component RPL15 of LSU proteome component | 0.21 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003860 | 3-hydroxyisobutyryl-CoA hydrolase activity | IEP | Neighborhood |
CC | GO:0005622 | intracellular | IEP | Neighborhood |
BP | GO:0006334 | nucleosome assembly | IEP | Neighborhood |
MF | GO:0008097 | 5S rRNA binding | IEP | Neighborhood |
MF | GO:0016289 | CoA hydrolase activity | IEP | Neighborhood |
MF | GO:0016790 | thiolester hydrolase activity | IEP | Neighborhood |
MF | GO:0019843 | rRNA binding | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
BP | GO:0034728 | nucleosome organization | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
BP | GO:0065004 | protein-DNA complex assembly | IEP | Neighborhood |
BP | GO:0071824 | protein-DNA complex subunit organization | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000439 | Ribosomal_L15e | 1 | 172 |
No external refs found! |