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  5. GSVIVT01014236001

GSVIVT01014236001


Description : RNA biosynthesis.transcriptional activation.TCP transcription factor


Gene families : OG0000332 (Archaeplastida) Phylogenetic Tree(s): OG0000332_tree ,
OG_05_0000167 (LandPlants) Phylogenetic Tree(s): OG_05_0000167_tree ,
OG_06_0000105 (SeedPlants) Phylogenetic Tree(s): OG_06_0000105_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014236001
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00158020 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TCP... 0.05 Archaeplastida
Gb_36354 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os01g11550.1 No alias transcription factor (TCP) 0.02 Archaeplastida
LOC_Os01g55750.1 No alias transcription factor (TCP) 0.05 Archaeplastida
LOC_Os03g57190.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os05g43760.1 No alias transcription factor (TCP) 0.03 Archaeplastida
LOC_Os07g05720.1 No alias transcription factor (TCP) 0.03 Archaeplastida
Smo89227 No alias RNA biosynthesis.transcriptional activation.TCP... 0.03 Archaeplastida
Solyc06g069240.2.1 No alias transcription factor (TCP) 0.02 Archaeplastida
Zm00001e005909_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e009811_P001 No alias transcription factor (TCP) 0.02 Archaeplastida
Zm00001e011516_P001 No alias transcription factor (TCP) 0.04 Archaeplastida
Zm00001e011911_P001 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e032122_P001 No alias transcription factor (TCP) 0.02 Archaeplastida
Zm00001e032821_P001 No alias transcription factor (TCP) 0.03 Archaeplastida
Zm00001e035648_P002 No alias transcription factor (TCP) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
CC GO:0017053 transcriptional repressor complex IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 42 147
No external refs found!