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  5. GSVIVT01014280001

GSVIVT01014280001


Description : Pentatricopeptide repeat-containing protein At1g06143 OS=Arabidopsis thaliana


Gene families : OG0015275 (Archaeplastida) Phylogenetic Tree(s): OG0015275_tree ,
OG_05_0016925 (LandPlants) Phylogenetic Tree(s): OG_05_0016925_tree ,
OG_06_0013512 (SeedPlants) Phylogenetic Tree(s): OG_06_0013512_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014280001
Cluster HCCA: Cluster_385

Target Alias Description ECC score Gene Family Method Actions
AT1G06143 No alias No description available 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 178 205
IPR002885 Pentatricopeptide_repeat 342 368
IPR002885 Pentatricopeptide_repeat 149 175
IPR002885 Pentatricopeptide_repeat 209 237
IPR002885 Pentatricopeptide_repeat 73 120
IPR002885 Pentatricopeptide_repeat 267 314
No external refs found!