Description : 30S ribosomal protein S8, chloroplastic OS=Vitis vinifera
Gene families : OG0008585 (Archaeplastida) Phylogenetic Tree(s): OG0008585_tree ,
OG_05_0010054 (LandPlants) Phylogenetic Tree(s): OG_05_0010054_tree ,
OG_06_0012240 (SeedPlants) Phylogenetic Tree(s): OG_06_0012240_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01014320001 | |
Cluster | HCCA: Cluster_99 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
ATCG00770 | RPS8 | ribosomal protein S8 | 0.06 | Archaeplastida | |
LOC_Os04g16832.1 | No alias | component psRPS8 of small ribosomal subunit proteome | 0.05 | Archaeplastida | |
LOC_Os05g22718.1 | No alias | component psRPS8 of small ribosomal subunit proteome | 0.05 | Archaeplastida | |
LOC_Os08g15278.1 | No alias | component psRPS8 of small ribosomal subunit proteome | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006508 | proteolysis | IEP | Neighborhood |
MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
CC | GO:0009507 | chloroplast | IEP | Neighborhood |
CC | GO:0009522 | photosystem I | IEP | Neighborhood |
CC | GO:0009536 | plastid | IEP | Neighborhood |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Neighborhood |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000630 | Ribosomal_S8 | 4 | 93 |
No external refs found! |