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  5. GSVIVT01014343001

GSVIVT01014343001


Description : Probable ubiquitin-conjugating enzyme E2 25 OS=Arabidopsis thaliana


Gene families : OG0000613 (Archaeplastida) Phylogenetic Tree(s): OG0000613_tree ,
OG_05_0002092 (LandPlants) Phylogenetic Tree(s): OG_05_0002092_tree ,
OG_06_0001160 (SeedPlants) Phylogenetic Tree(s): OG_06_0001160_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014343001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000053.13 No alias Probable ubiquitin-conjugating enzyme E2 23... 0.03 Archaeplastida
Cre08.g383702 No alias Putative ubiquitin-conjugating enzyme E2 39... 0.03 Archaeplastida
Gb_29475 No alias ubiquitin-conjugating E2 protein (PHO2) 0.02 Archaeplastida
MA_11973g0010 No alias Probable ubiquitin-conjugating enzyme E2 25... 0.02 Archaeplastida
Pp3c14_14750V3.1 No alias ubiquitin-conjugating enzyme 25 0.03 Archaeplastida
Solyc10g007000.3.1 No alias Probable ubiquitin-conjugating enzyme E2 25... 0.1 Archaeplastida
Zm00001e025713_P002 No alias Probable ubiquitin-conjugating enzyme E2 23... 0.05 Archaeplastida
Zm00001e032386_P004 No alias Probable ubiquitin-conjugating enzyme E2 26... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:1902554 serine/threonine protein kinase complex IEP Neighborhood
CC GO:1902911 protein kinase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
CC GO:1990316 Atg1/ULK1 kinase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 227 351
No external refs found!