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  5. GSVIVT01014360001

GSVIVT01014360001


Description : Redox homeostasis.chloroplast redox homeostasis.M-type thioredoxin


Gene families : OG0000516 (Archaeplastida) Phylogenetic Tree(s): OG0000516_tree ,
OG_05_0000996 (LandPlants) Phylogenetic Tree(s): OG_05_0000996_tree ,
OG_06_0001150 (SeedPlants) Phylogenetic Tree(s): OG_06_0001150_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014360001
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00016000 evm_27.TU.AmTr_v1... Redox homeostasis.chloroplast redox homeostasis.M-type... 0.12 Archaeplastida
AT1G03680 ATHM1, THM1, TRX-M1, ATM1 thioredoxin M-type 1 0.08 Archaeplastida
AT1G43560 Aty2, ty2 thioredoxin Y2 0.07 Archaeplastida
AT1G50320 THX, ATHX, ATX thioredoxin X 0.08 Archaeplastida
AT3G15360 ATHM4, TRX-M4, ATM4 thioredoxin M-type 4 0.15 Archaeplastida
Cpa|evm.model.tig00001477.10 No alias Redox homeostasis.chloroplast redox homeostasis.X-type... 0.02 Archaeplastida
Cre01.g052250 No alias Redox homeostasis.chloroplast redox homeostasis.X-type... 0.03 Archaeplastida
Gb_00914 No alias M-type thioredoxin 0.03 Archaeplastida
Gb_31181 No alias M-type thioredoxin 0.02 Archaeplastida
Gb_37068 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g57930.1 No alias X-type thioredoxin 0.08 Archaeplastida
LOC_Os12g08730.1 No alias M-type thioredoxin 0.03 Archaeplastida
MA_10433314g0010 No alias X-type thioredoxin 0.05 Archaeplastida
MA_474303g0010 No alias M-type thioredoxin 0.03 Archaeplastida
Mp4g18950.1 No alias M-type thioredoxin 0.13 Archaeplastida
Pp3c24_4980V3.1 No alias thioredoxin X 0.04 Archaeplastida
Pp3c25_2880V3.1 No alias thioredoxin M-type 1 0.02 Archaeplastida
Pp3c5_23070V3.1 No alias thioredoxin M-type 1 0.04 Archaeplastida
Pp3c6_10040V3.1 No alias Thioredoxin superfamily protein 0.08 Archaeplastida
Smo74205 No alias Redox homeostasis.chloroplast redox homeostasis.Y-type... 0.02 Archaeplastida
Solyc01g008250.3.1 No alias X-type thioredoxin 0.07 Archaeplastida
Solyc04g071560.4.1 No alias Y-type thioredoxin 0.08 Archaeplastida
Solyc07g063190.3.1 No alias M-type thioredoxin 0.09 Archaeplastida
Solyc10g006970.3.1 No alias M-type thioredoxin 0.07 Archaeplastida
Solyc12g013810.2.1 No alias M-type thioredoxin 0.1 Archaeplastida
Zm00001e006545_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e018385_P001 No alias M-type thioredoxin 0.05 Archaeplastida
Zm00001e039586_P001 No alias M-type thioredoxin 0.06 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009522 photosystem I IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009538 photosystem I reaction center IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 88 185
No external refs found!