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  5. GSVIVT01014386001

GSVIVT01014386001


Description : Stem-specific protein TSJT1 OS=Nicotiana tabacum


Gene families : OG0000604 (Archaeplastida) Phylogenetic Tree(s): OG0000604_tree ,
OG_05_0001003 (LandPlants) Phylogenetic Tree(s): OG_05_0001003_tree ,
OG_06_0004247 (SeedPlants) Phylogenetic Tree(s): OG_06_0004247_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014386001
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00269560 evm_27.TU.AmTr_v1... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.05 Archaeplastida
AMTR_s00009p00267130 evm_27.TU.AmTr_v1... Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.07 Archaeplastida
AT3G15450 No alias Aluminium induced protein with YGL and LRDR motifs 0.08 Archaeplastida
AT5G19140 ATAILP1, AILP1 Aluminium induced protein with YGL and LRDR motifs 0.03 Archaeplastida
Cre16.g680700 No alias No description available 0.02 Archaeplastida
LOC_Os03g53270.1 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 Archaeplastida
MA_10434639g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 Archaeplastida
MA_12061g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 Archaeplastida
MA_20406g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.07 Archaeplastida
MA_208841g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_3443g0010 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 Archaeplastida
Mp7g03680.1 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.03 Archaeplastida
Smo227818 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum 0.03 Archaeplastida
Solyc12g013700.2.1 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.06 Archaeplastida
Zm00001e005643_P001 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.04 Archaeplastida
Zm00001e041947_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR024286 DUF3700 2 230
No external refs found!