1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01014602001

GSVIVT01014602001


Description : Vesicle trafficking.autophagosome formation.ATG9-2-18 membrane shuttling complex.ATG18 component


Gene families : OG0002452 (Archaeplastida) Phylogenetic Tree(s): OG0002452_tree ,
OG_05_0001770 (LandPlants) Phylogenetic Tree(s): OG_05_0001770_tree ,
OG_06_0001756 (SeedPlants) Phylogenetic Tree(s): OG_06_0001756_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014602001
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00257260 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 Archaeplastida
AT1G03380 ATATG18G, ATG18G homolog of yeast autophagy 18 (ATG18) G 0.07 Archaeplastida
Gb_30797 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 Archaeplastida
LOC_Os05g33610.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Pp3c23_8190V3.1 No alias homolog of yeast autophagy 18 (ATG18) H 0.02 Archaeplastida
Pp3c8_5760V3.1 No alias homolog of yeast autophagy 18 (ATG18) H 0.03 Archaeplastida
Solyc07g064060.3.1 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.04 Archaeplastida
Zm00001e019603_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Zm00001e027088_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida
Zm00001e031636_P001 No alias component ATG18 of autophagosome ATG9-2-18 membrane... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
CC GO:0030677 ribonuclease P complex IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1902555 endoribonuclease complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
CC GO:1905348 endonuclease complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 374 403
No external refs found!