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  5. GSVIVT01014754001

GSVIVT01014754001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0010252 (LandPlants) Phylogenetic Tree(s): OG_05_0010252_tree ,
OG_06_0005097 (SeedPlants) Phylogenetic Tree(s): OG_06_0005097_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01014754001
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
LOC_Os03g62100.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Solyc02g082390.1.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc04g005100.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc04g008870.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc12g008800.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc12g089170.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 104 148
No external refs found!