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  5. GSVIVT01015003001

GSVIVT01015003001


Description : Vesicle trafficking.target membrane tethering.COG (Conserved-Oligomeric Golgi) complex.COG3 component


Gene families : OG0003974 (Archaeplastida) Phylogenetic Tree(s): OG0003974_tree ,
OG_05_0004309 (LandPlants) Phylogenetic Tree(s): OG_05_0004309_tree ,
OG_06_0004017 (SeedPlants) Phylogenetic Tree(s): OG_06_0004017_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015003001
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000241.32 No alias Vesicle trafficking.target membrane tethering.COG... 0.02 Archaeplastida
Cre03.g203750 No alias Vesicle trafficking.target membrane tethering.COG... 0.04 Archaeplastida
Mp2g16810.1 No alias component COG3 of COG (Conserved-Oligomeric Golgi) complex 0.03 Archaeplastida
Pp3c10_7010V3.1 No alias sec34-like family protein 0.04 Archaeplastida
Smo113648 No alias Vesicle trafficking.target membrane tethering.COG... 0.03 Archaeplastida
Solyc04g008640.3.1 No alias component COG3 of COG (Conserved-Oligomeric Golgi) complex 0.09 Archaeplastida
Zm00001e004051_P005 No alias component COG3 of COG (Conserved-Oligomeric Golgi) complex 0.13 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005801 cis-Golgi network IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004583 dolichyl-phosphate-glucose-glycolipid alpha-glucosyltransferase activity IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
CC GO:0005856 cytoskeleton IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016482 cytosolic transport IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030014 CCR4-NOT complex IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0030906 retromer, cargo-selective complex IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0042147 retrograde transport, endosome to Golgi IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR007265 COG_su3 115 262
No external refs found!