GSVIVT01015056001


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS29 component


Gene families : OG0004664 (Archaeplastida) Phylogenetic Tree(s): OG0004664_tree ,
OG_05_0003789 (LandPlants) Phylogenetic Tree(s): OG_05_0003789_tree ,
OG_06_0004187 (SeedPlants) Phylogenetic Tree(s): OG_06_0004187_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015056001
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AT3G43980 No alias Ribosomal protein S14p/S29e family protein 0.03 Archaeplastida
AT3G44010 No alias Ribosomal protein S14p/S29e family protein 0.06 Archaeplastida
AT4G33865 No alias Ribosomal protein S14p/S29e family protein 0.06 Archaeplastida
Cre08.g358556 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.09 Archaeplastida
LOC_Os03g56241.1 No alias component RPS29 of SSU proteome 0.07 Archaeplastida
LOC_Os11g41610.1 No alias component RPS29 of SSU proteome 0.11 Archaeplastida
LOC_Os12g32380.1 No alias component RPS29 of SSU proteome 0.03 Archaeplastida
MA_10436379g0010 No alias component RPS29 of SSU proteome 0.08 Archaeplastida
MA_336247g0010 No alias component RPS29 of SSU proteome 0.04 Archaeplastida
Mp5g15120.1 No alias component RPS29 of SSU proteome 0.07 Archaeplastida
Mp8g03910.1 No alias component RPS29 of SSU proteome 0.05 Archaeplastida
Pp3c10_7980V3.1 No alias Ribosomal protein S14p/S29e family protein 0.08 Archaeplastida
Pp3c14_10190V3.1 No alias Ribosomal protein S14p/S29e family protein 0.03 Archaeplastida
Pp3c2_6730V3.1 No alias Ribosomal protein S14p/S29e family protein 0.12 Archaeplastida
Solyc06g073430.4.1 No alias component RPS29 of SSU proteome 0.06 Archaeplastida
Solyc11g020877.1.1 No alias component RPS29 of SSU proteome 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006405 RNA export from nucleus IEP Neighborhood
BP GO:0006406 mRNA export from nucleus IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0050657 nucleic acid transport IEP Neighborhood
BP GO:0050658 RNA transport IEP Neighborhood
BP GO:0051028 mRNA transport IEP Neighborhood
BP GO:0051168 nuclear export IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051236 establishment of RNA localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001209 Ribosomal_S14 7 54
No external refs found!