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  5. GSVIVT01015203001

GSVIVT01015203001


Description : Cell wall.pectin.rhamnogalacturonan I.modification and degradation.beta-galactosidase


Gene families : OG0000133 (Archaeplastida) Phylogenetic Tree(s): OG0000133_tree ,
OG_05_0000245 (LandPlants) Phylogenetic Tree(s): OG_05_0000245_tree ,
OG_06_0001808 (SeedPlants) Phylogenetic Tree(s): OG_06_0001808_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015203001
Cluster HCCA: Cluster_243

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00054p00149030 evm_27.TU.AmTr_v1... Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
AT3G13750 BGAL1 beta galactosidase 1 0.07 Archaeplastida
AT5G56870 BGAL4 beta-galactosidase 4 0.07 Archaeplastida
GSVIVT01015038001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.06 Archaeplastida
GSVIVT01022353001 No alias Cell wall.pectin.rhamnogalacturonan I.modification and... 0.03 Archaeplastida
Gb_32359 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Gb_39826 No alias Beta-galactosidase 6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Gb_39827 No alias Beta-galactosidase 8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g36810.1 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
MA_11388g0010 No alias Beta-galactosidase 3 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
MA_14774g0010 No alias beta-galactosidase (BGAL) 0.06 Archaeplastida
MA_217488g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_329922g0010 No alias beta-galactosidase (BGAL) 0.05 Archaeplastida
MA_55965g0010 No alias beta-galactosidase (BGAL) 0.05 Archaeplastida
Solyc07g042220.2.1 No alias beta-galactosidase (BGAL) 0.03 Archaeplastida
Zm00001e013679_P001 No alias Beta-galactosidase 12 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e018433_P002 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida
Zm00001e019757_P001 No alias beta-galactosidase (BGAL) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Neighborhood
MF GO:0004806 triglyceride lipase activity IEP Neighborhood
CC GO:0005743 mitochondrial inner membrane IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006528 asparagine metabolic process IEP Neighborhood
BP GO:0006529 asparagine biosynthetic process IEP Neighborhood
BP GO:0006839 mitochondrial transport IEP Neighborhood
BP GO:0006848 pyruvate transport IEP Neighborhood
BP GO:0006850 mitochondrial pyruvate transmembrane transport IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0015718 monocarboxylic acid transport IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Neighborhood
CC GO:0019866 organelle inner membrane IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1901475 pyruvate transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
BP GO:1990542 mitochondrial transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000922 Lectin_gal-bd_dom 755 832
IPR031330 Gly_Hdrlase_35_cat 29 334
No external refs found!