Description : WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana
Gene families : OG0003917 (Archaeplastida) Phylogenetic Tree(s): OG0003917_tree ,
OG_05_0003953 (LandPlants) Phylogenetic Tree(s): OG_05_0003953_tree ,
OG_06_0004561 (SeedPlants) Phylogenetic Tree(s): OG_06_0004561_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01015210001 | |
Cluster | HCCA: Cluster_44 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00044p00164390 | evm_27.TU.AmTr_v1... | Histone-binding protein MSI1 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
AT2G19540 | No alias | Transducin family protein / WD-40 repeat family protein | 0.04 | Archaeplastida | |
Cpa|evm.model.tig00001493.9 | No alias | No description available | 0.04 | Archaeplastida | |
Cre17.g724850 | No alias | WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana | 0.09 | Archaeplastida | |
LOC_Os12g03822.1 | No alias | Histone-binding protein MSI1 homolog OS=Oryza sativa... | 0.07 | Archaeplastida | |
MA_10425957g0010 | No alias | Histone-binding protein MSI1 OS=Arabidopsis thaliana... | 0.1 | Archaeplastida | |
Mp4g21540.1 | No alias | Histone-binding protein MSI1 homolog OS=Oryza sativa... | 0.05 | Archaeplastida | |
Pp3c12_16950V3.1 | No alias | Transducin family protein / WD-40 repeat family protein | 0.07 | Archaeplastida | |
Solyc07g039200.4.1 | No alias | WD-40 repeat-containing protein MSI2 OS=Arabidopsis... | 0.12 | Archaeplastida | |
Zm00001e020846_P004 | No alias | Histone-binding protein MSI1 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Zm00001e027495_P001 | No alias | WD-40 repeat-containing protein MSI4 OS=Arabidopsis... | 0.07 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0001510 | RNA methylation | IEP | Neighborhood |
BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
MF | GO:0003723 | RNA binding | IEP | Neighborhood |
MF | GO:0003743 | translation initiation factor activity | IEP | Neighborhood |
MF | GO:0004177 | aminopeptidase activity | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
CC | GO:0005737 | cytoplasm | IEP | Neighborhood |
CC | GO:0005759 | mitochondrial matrix | IEP | Neighborhood |
CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006396 | RNA processing | IEP | Neighborhood |
BP | GO:0006400 | tRNA modification | IEP | Neighborhood |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Neighborhood |
MF | GO:0008565 | protein transporter activity | IEP | Neighborhood |
BP | GO:0009451 | RNA modification | IEP | Neighborhood |
BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
BP | GO:0016556 | mRNA modification | IEP | Neighborhood |
BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Neighborhood |
MF | GO:0030145 | manganese ion binding | IEP | Neighborhood |
BP | GO:0030488 | tRNA methylation | IEP | Neighborhood |
CC | GO:0030684 | preribosome | IEP | Neighborhood |
CC | GO:0031515 | tRNA (m1A) methyltransferase complex | IEP | Neighborhood |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Neighborhood |
CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
BP | GO:0032259 | methylation | IEP | Neighborhood |
MF | GO:0032977 | membrane insertase activity | IEP | Neighborhood |
BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
CC | GO:0034708 | methyltransferase complex | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
BP | GO:0042254 | ribosome biogenesis | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043233 | organelle lumen | IEP | Neighborhood |
BP | GO:0043414 | macromolecule methylation | IEP | Neighborhood |
CC | GO:0043527 | tRNA methyltransferase complex | IEP | Neighborhood |
BP | GO:0044085 | cellular component biogenesis | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
CC | GO:0070013 | intracellular organelle lumen | IEP | Neighborhood |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
BP | GO:0080009 | mRNA methylation | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
No external refs found! |