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  5. GSVIVT01015258001

GSVIVT01015258001


Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS32/SNF7 component


Gene families : OG0001223 (Archaeplastida) Phylogenetic Tree(s): OG0001223_tree ,
OG_05_0001557 (LandPlants) Phylogenetic Tree(s): OG_05_0001557_tree ,
OG_06_0001828 (SeedPlants) Phylogenetic Tree(s): OG_06_0001828_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015258001
Cluster HCCA: Cluster_130

Target Alias Description ECC score Gene Family Method Actions
AT4G29160 SNF7.1 SNF7 family protein 0.04 Archaeplastida
Cre06.g282200 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
LOC_Os09g09480.2 No alias component VPS32/SNF7 of ESCRT-III complex 0.03 Archaeplastida
MA_10435786g0010 No alias component VPS32/SNF7 of ESCRT-III complex 0.02 Archaeplastida
MA_216716g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp6g10770.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.05 Archaeplastida
Pp3c4_3530V3.1 No alias SNF7 family protein 0.03 Archaeplastida
Solyc05g026050.4.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.04 Archaeplastida
Solyc08g065900.4.1 No alias component VPS32/SNF7 of ESCRT-III complex 0.05 Archaeplastida
Zm00001e024016_P002 No alias component VPS32/SNF7 of ESCRT-III complex 0.03 Archaeplastida
Zm00001e037444_P001 No alias component VPS32/SNF7 of ESCRT-III complex 0.07 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
MF GO:1901567 fatty acid derivative binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005024 Snf7_fam 20 186
No external refs found!