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  5. GSVIVT01015287001

GSVIVT01015287001


Description : Vesicle trafficking.endomembrane trafficking.PI3-kinase vesicle nucleation complex I/II.VPS15 regulatory component


Gene families : OG0003925 (Archaeplastida) Phylogenetic Tree(s): OG0003925_tree ,
OG_05_0004850 (LandPlants) Phylogenetic Tree(s): OG_05_0004850_tree ,
OG_06_0006877 (SeedPlants) Phylogenetic Tree(s): OG_06_0006877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015287001
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AT4G29380 No alias protein kinase family protein / WD-40 repeat family protein 0.04 Archaeplastida
Cre06.g290500 No alias Vesicle trafficking.endomembrane trafficking.PI3-kinase... 0.03 Archaeplastida
Gb_24427 No alias protein kinase (VPS15). regulatory component VPS15 of... 0.05 Archaeplastida
LOC_Os02g55340.1 No alias protein kinase (VPS15). regulatory component VPS15 of... 0.05 Archaeplastida
MA_10195045g0020 No alias protein kinase (VPS15). regulatory component VPS15 of... 0.04 Archaeplastida
Pp3c15_10000V3.1 No alias protein kinase family protein / WD-40 repeat family protein 0.02 Archaeplastida
Pp3c9_3860V3.1 No alias protein kinase family protein / WD-40 repeat family protein 0.03 Archaeplastida
Solyc04g012170.4.1 No alias protein kinase (VPS15). regulatory component VPS15 of... 0.06 Archaeplastida
Zm00001e016126_P001 No alias protein kinase (VPS15). regulatory component VPS15 of... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000719 Prot_kinase_dom 29 292
IPR001680 WD40_repeat 926 962
IPR000357 HEAT 449 477
No external refs found!