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  5. GSVIVT01015306001

GSVIVT01015306001


Description : Solute transport.primary active transport.ABC superfamily.ABC1 family.subfamily ABCB transporter


Gene families : OG0000057 (Archaeplastida) Phylogenetic Tree(s): OG0000057_tree ,
OG_05_0000720 (LandPlants) Phylogenetic Tree(s): OG_05_0000720_tree ,
OG_06_0000544 (SeedPlants) Phylogenetic Tree(s): OG_06_0000544_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015306001
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00263610 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00018p00193700 evm_27.TU.AmTr_v1... ABC transporter B family member 14 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00018p00193820 evm_27.TU.AmTr_v1... ABC transporter B family member 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00045p00108620 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00045p00109940 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
AMTR_s00056p00132920 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00076p00195870 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00090p00165440 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AT1G02520 PGP11 P-glycoprotein 11 0.03 Archaeplastida
AT3G28390 PGP18 P-glycoprotein 18 0.02 Archaeplastida
AT3G55320 PGP20 P-glycoprotein 20 0.02 Archaeplastida
AT4G01820 PGP3, MDR3 P-glycoprotein 3 0.04 Archaeplastida
AT4G18050 PGP9 P-glycoprotein 9 0.03 Archaeplastida
AT5G46540 PGP7 P-glycoprotein 7 0.04 Archaeplastida
GSVIVT01017696001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01032578001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Gb_01718 No alias subfamily ABCB transporter 0.03 Archaeplastida
Gb_02469 No alias subfamily ABCB transporter 0.03 Archaeplastida
Gb_10215 No alias subfamily ABCB transporter 0.03 Archaeplastida
Gb_27347 No alias subfamily ABCB transporter 0.04 Archaeplastida
LOC_Os01g18670.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
LOC_Os01g50080.1 No alias subfamily ABCB transporter 0.04 Archaeplastida
LOC_Os01g50100.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
LOC_Os04g38570.1 No alias auxin efflux transporter (ABCB19) 0.03 Archaeplastida
LOC_Os04g54930.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
LOC_Os08g45030.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
MA_10432922g0010 No alias subfamily ABCB transporter 0.04 Archaeplastida
MA_293226g0010 No alias No annotation 0.02 Archaeplastida
MA_635039g0010 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_636449g0010 No alias subfamily ABCB transporter 0.02 Archaeplastida
Mp2g02910.1 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 Archaeplastida
Mp2g11920.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
Pp3c1_31680V3.1 No alias ABC transporter family protein 0.02 Archaeplastida
Pp3c1_7210V3.1 No alias ATP binding cassette subfamily B19 0.02 Archaeplastida
Smo408755 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo419448 No alias ABC transporter B family member 19 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo84555 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Solyc03g005860.4.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Solyc06g009280.1.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Solyc12g098840.3.1 No alias subfamily ABCB transporter 0.03 Archaeplastida
Zm00001e003866_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e014797_P002 No alias subfamily ABCB transporter 0.03 Archaeplastida
Zm00001e020073_P001 No alias subfamily ABCB transporter 0.03 Archaeplastida
Zm00001e023274_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e025063_P001 No alias subfamily ABCB transporter 0.02 Archaeplastida
Zm00001e025438_P001 No alias subfamily ABCB transporter 0.03 Archaeplastida
Zm00001e028117_P001 No alias subfamily ABCB transporter 0.04 Archaeplastida
Zm00001e041008_P003 No alias auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.06 Archaeplastida
Zm00001e041087_P002 No alias subfamily ABCB transporter 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 333 482
IPR011527 ABC1_TM_dom 9 253
IPR011527 ABC1_TM_dom 602 714
IPR003439 ABC_transporter-like 791 938
No external refs found!