GSVIVT01015325001

Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana

Gene families : OG0012703 (Archaeplastida) Phylogenetic Tree(s): OG0012703_tree ,
OG_05_0018169 (LandPlants) Phylogenetic Tree(s): OG_05_0018169_tree ,
OG_06_0017768 (SeedPlants) Phylogenetic Tree(s): OG_06_0017768_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01015325001
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method	Actions
Gb_04234	No alias	Pentatricopeptide repeat-containing protein At2g22070...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006400	tRNA modification	IEP	Neighborhood
BP	GO:0008033	tRNA processing	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	119	166
IPR002885	Pentatricopeptide_repeat	285	334
IPR002885	Pentatricopeptide_repeat	219	264
IPR002885	Pentatricopeptide_repeat	387	434
IPR002885	Pentatricopeptide_repeat	90	116
IPR002885	Pentatricopeptide_repeat	62	88
IPR002885	Pentatricopeptide_repeat	461	485
IPR032867	DYW_dom	563	684

External Links

No external refs found!