GSVIVT01015363001


Description : RNA biosynthesis.transcriptional activation.CPP1-like transcription factor


Gene families : OG0000498 (Archaeplastida) Phylogenetic Tree(s): OG0000498_tree ,
OG_05_0003860 (LandPlants) Phylogenetic Tree(s): OG_05_0003860_tree ,
OG_06_0004569 (SeedPlants) Phylogenetic Tree(s): OG_06_0004569_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015363001
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Cre12.g550250 No alias RNA biosynthesis.transcriptional activation.CPP1-like... 0.02 Archaeplastida
Gb_31187 No alias CPP1-like transcription factor 0.05 Archaeplastida
LOC_Os07g07974.1 No alias CPP1-like transcription factor 0.03 Archaeplastida
Pp3c20_9210V3.1 No alias Tesmin/TSO1-like CXC domain-containing protein 0.02 Archaeplastida
Solyc07g020710.3.1 No alias CPP1-like transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003712 transcription coregulator activity IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005172 CRC 124 159
IPR005172 CRC 38 73
No external refs found!