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  5. GSVIVT01015369001

GSVIVT01015369001


Description : Multi-process regulation.Rop GTPase regulatory system.RopGEF guanine nucleotide exchange activities.PRONE-type exchange factor


Gene families : OG0000251 (Archaeplastida) Phylogenetic Tree(s): OG0000251_tree ,
OG_05_0001518 (LandPlants) Phylogenetic Tree(s): OG_05_0001518_tree ,
OG_06_0000896 (SeedPlants) Phylogenetic Tree(s): OG_06_0000896_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015369001
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00264790 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.03 Archaeplastida
AMTR_s00109p00064220 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.14 Archaeplastida
AT1G52240 ATROPGEF11,... RHO guanyl-nucleotide exchange factor 11 0.09 Archaeplastida
AT1G79860 ROPGEF12, MEE64,... RHO guanyl-nucleotide exchange factor 12 0.12 Archaeplastida
AT2G45890 ATROPGEF4, RHS11, ROPGEF4 RHO guanyl-nucleotide exchange factor 4 0.08 Archaeplastida
AT3G16130 PIRF2, ROPGEF13,... RHO guanyl-nucleotide exchange factor 13 0.03 Archaeplastida
AT3G24620 ROPGEF8, ATROPGEF8 RHO guanyl-nucleotide exchange factor 8 0.08 Archaeplastida
AT4G13240 ATROPGEF9, ROPGEF9 RHO guanyl-nucleotide exchange factor 9 0.1 Archaeplastida
AT5G02010 ROPGEF7, ATROPGEF7 RHO guanyl-nucleotide exchange factor 7 0.03 Archaeplastida
AT5G19560 ATROPGEF10, ROPGEF10 ROP uanine nucleotide exchange factor 10 0.03 Archaeplastida
Gb_34956 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.02 Archaeplastida
LOC_Os01g48410.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.16 Archaeplastida
LOC_Os01g55520.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.12 Archaeplastida
LOC_Os02g17240.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.12 Archaeplastida
LOC_Os04g47170.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
LOC_Os05g38000.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
LOC_Os05g48640.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.07 Archaeplastida
LOC_Os09g37270.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Solyc01g094610.4.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Solyc03g120650.4.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.15 Archaeplastida
Solyc07g032730.4.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Solyc12g007150.3.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.04 Archaeplastida
Solyc12g044270.2.1 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.11 Archaeplastida
Zm00001e007278_P001 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.01 Archaeplastida
Zm00001e014205_P002 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.09 Archaeplastida
Zm00001e015569_P002 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida
Zm00001e019750_P001 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.08 Archaeplastida
Zm00001e020182_P002 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.11 Archaeplastida
Zm00001e024760_P001 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.1 Archaeplastida
Zm00001e026517_P004 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.11 Archaeplastida
Zm00001e034952_P003 No alias PRONE-type RopGEF guanine nucleotide exchange factor 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016829 lyase activity IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005512 PRONE_dom 103 449
No external refs found!