1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00039p00088760

AMTR_s00039p00088760 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.49

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000734 (SeedPlants) Phylogenetic Tree(s): OG_06_0000734_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00088760

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00185480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
AMTR_s00058p00066390 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.04 Archaeplastida
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.02 Archaeplastida
AT1G06160 ORA59 octadecanoid-responsive Arabidopsis AP2/ERF 59 0.02 Archaeplastida
AT1G71520 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G75490 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT2G22200 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT2G25820 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT2G36450 HRD Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT3G23240 ERF1, ATERF1 ethylene response factor 1 0.03 Archaeplastida
AT3G50260 DEAR1, CEJ1, ATERF#011 cooperatively regulated by ethylene and jasmonate 1 0.02 Archaeplastida
AT3G57600 No alias Integrase-type DNA-binding superfamily protein 0.05 Archaeplastida
AT4G16750 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G17490 ERF-6-6, ERF6, ATERF6 ethylene responsive element binding factor 6 0.02 Archaeplastida
AT4G25490 DREB1B, ATCBF1, CBF1 C-repeat/DRE binding factor 1 0.01 Archaeplastida
AT4G31060 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G11590 TINY2 Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G18450 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT5G43410 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
GSVIVT01001089001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01009801001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01017572001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.01 Archaeplastida
GSVIVT01018272001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01021146001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01032983001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01034563001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01036201001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_03782 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_03783 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_07475 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_07992 No alias Ethylene-responsive transcription factor RAP2-9... 0.02 Archaeplastida
Gb_09495 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Gb_11793 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_12583 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_19320 No alias transcription factor (ERF) 0.05 Archaeplastida
Gb_23321 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_23870 No alias transcription factor (DREB) 0.03 Archaeplastida
Gb_26067 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_26662 No alias transcription factor (ERF) 0.03 Archaeplastida
Gb_34846 No alias transcription factor (ERF) 0.02 Archaeplastida
Gb_35633 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_41020 No alias transcription factor (DREB) 0.02 Archaeplastida
Gb_41836 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os01g66270.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os01g73770.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os02g43820.1 No alias transcription factor (ERF) 0.05 Archaeplastida
LOC_Os02g43970.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os02g51670.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os03g64260.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g32620.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g44670.1 No alias transcription factor (DREB) 0.03 Archaeplastida
LOC_Os04g46220.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os04g46240.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g46250.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os04g46410.1 No alias transcription factor (DREB) 0.05 Archaeplastida
LOC_Os05g36100.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os05g49010.1 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os05g49700.1 No alias transcription factor (DREB) 0.02 Archaeplastida
LOC_Os06g07030.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os06g10780.1 No alias transcription factor (DREB) 0.04 Archaeplastida
LOC_Os07g22730.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g36920.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os08g45110.1 No alias transcription factor (DREB) 0.06 Archaeplastida
LOC_Os09g11480.2 No alias Ethylene-responsive transcription factor ERF112... 0.02 Archaeplastida
LOC_Os09g28440.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os10g22600.1 No alias transcription factor (DREB) 0.01 Archaeplastida
LOC_Os11g13840.1 No alias transcription factor (DREB) 0.05 Archaeplastida
LOC_Os12g41060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_100724g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10266433g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_10274g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_10427743g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10430769g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_10436654g0010 No alias Ethylene-responsive transcription factor ERF018... 0.02 Archaeplastida
MA_162045g0010 No alias transcription factor (DREB) 0.03 Archaeplastida
MA_17001g0020 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_179692g0020 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_214063g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_27309g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_3758g0010 No alias Ethylene-responsive transcription factor ERF013... 0.02 Archaeplastida
MA_411387g0010 No alias transcription factor (ERF) 0.02 Archaeplastida
MA_4182g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_4929994g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_500288g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_5979847g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_844983g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_924346g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
MA_959784g0010 No alias transcription factor (DREB) 0.02 Archaeplastida
Mp5g06970.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Pp3c10_6600V3.1 No alias cytokinin response factor 4 0.02 Archaeplastida
Pp3c16_13280V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c16_17550V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c21_13130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c26_14710V3.1 No alias ethylene responsive element binding factor 1 0.02 Archaeplastida
Pp3c4_2530V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c5_22280V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c7_20200V3.1 No alias ethylene responsive element binding factor 2 0.01 Archaeplastida
Smo104980 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
Solyc01g005630.3.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.03 Archaeplastida
Solyc01g009440.3.1 No alias transcription factor (DREB) 0.05 Archaeplastida
Solyc01g090340.3.1 No alias Ethylene-responsive transcription factor 13... 0.02 Archaeplastida
Solyc01g090345.1.1 No alias Ethylene-responsive transcription factor 13... 0.03 Archaeplastida
Solyc01g090370.3.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc02g067020.1.1 No alias transcription factor (ERF). transcription factor (ERN1) 0.01 Archaeplastida
Solyc02g077360.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc02g077370.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc02g090790.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc03g095977.1.1 No alias transcription factor (DREB) 0.02 Archaeplastida
Solyc03g117130.3.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc03g118190.4.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Solyc04g012050.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc04g050750.2.1 No alias transcription factor (DREB) 0.07 Archaeplastida
Solyc04g071770.3.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc04g072300.1.1 No alias Ethylene-responsive transcription factor FZP OS=Oryza... 0.03 Archaeplastida
Solyc04g080910.1.1 No alias transcription factor (DREB) 0.05 Archaeplastida
Solyc05g050790.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc05g052030.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g051840.1.1 No alias transcription factor (ERF) 0.04 Archaeplastida
Solyc06g063070.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc06g068830.2.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc08g078170.1.1 No alias transcription factor (ERF) 0.05 Archaeplastida
Solyc08g078180.1.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc09g089910.1.1 No alias transcription factor (ERF). transcription factor (DREB) 0.03 Archaeplastida
Solyc09g089930.3.1 No alias transcription factor (ERF) 0.03 Archaeplastida
Solyc11g042560.1.1 No alias transcription factor (DREB) 0.03 Archaeplastida
Solyc12g042210.2.1 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e003061_P001 No alias transcription factor (ERF). transcription factor (ERN1) 0.01 Archaeplastida
Zm00001e003858_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e014008_P002 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
Zm00001e014659_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e015314_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e015429_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e022016_P001 No alias transcription factor (DREB) 0.05 Archaeplastida
Zm00001e023224_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e023759_P001 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
Zm00001e023804_P001 No alias Ethylene-responsive transcription factor ERF013... 0.02 Archaeplastida
Zm00001e023816_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e025999_P001 No alias transcription factor (DREB) 0.04 Archaeplastida
Zm00001e026573_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e029041_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e030090_P001 No alias transcription factor (DREB) 0.03 Archaeplastida
Zm00001e030585_P001 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.02 Archaeplastida
Zm00001e031497_P001 No alias Ethylene-responsive transcription factor ABI4 OS=Oryza... 0.03 Archaeplastida
Zm00001e033537_P001 No alias transcription factor (ERF) 0.02 Archaeplastida
Zm00001e039555_P001 No alias no hits & (original description: none) 0.01 Archaeplastida
Zm00001e041288_P001 No alias transcription factor (DREB) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
CC GO:0005811 lipid droplet IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0007346 regulation of mitotic cell cycle IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
CC GO:0009317 acetyl-CoA carboxylase complex IEP Neighborhood
BP GO:0010564 regulation of cell cycle process IEP Neighborhood
CC GO:0012511 monolayer-surrounded lipid storage body IEP Neighborhood
BP GO:0016108 tetraterpenoid metabolic process IEP Neighborhood
BP GO:0016109 tetraterpenoid biosynthetic process IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
BP GO:0016116 carotenoid metabolic process IEP Neighborhood
BP GO:0016117 carotenoid biosynthetic process IEP Neighborhood
MF GO:0016421 CoA carboxylase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016855 racemase and epimerase activity, acting on amino acids and derivatives IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0030955 potassium ion binding IEP Neighborhood
MF GO:0031420 alkali metal ion binding IEP Neighborhood
BP GO:0032465 regulation of cytokinesis IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0032954 regulation of cytokinetic process IEP Neighborhood
BP GO:0032955 regulation of division septum assembly IEP Neighborhood
MF GO:0036361 racemase activity, acting on amino acids and derivatives IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044087 regulation of cellular component biogenesis IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046148 pigment biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051301 cell division IEP Neighborhood
BP GO:0051302 regulation of cell division IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
MF GO:0051920 peroxiredoxin activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:1901891 regulation of cell septum assembly IEP Neighborhood
BP GO:1902412 regulation of mitotic cytokinesis IEP Neighborhood
BP GO:1903436 regulation of mitotic cytokinetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 26 75
No external refs found!