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  5. AMTR_s00039p00093490

AMTR_s00039p00093490 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.50

Description : Solute transport.primary active transport.V-type ATPase complex.peripheral V1 subcomplex.subunit F


Gene families : OG0004334 (Archaeplastida) Phylogenetic Tree(s): OG0004334_tree ,
OG_05_0004835 (LandPlants) Phylogenetic Tree(s): OG_05_0004835_tree ,
OG_06_0005894 (SeedPlants) Phylogenetic Tree(s): OG_06_0005894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00093490
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
AT4G02620 No alias vacuolar ATPase subunit F family protein 0.03 Archaeplastida
LOC_Os02g57854.1 No alias subunit F of V-type ATPase peripheral V1 subcomplex 0.03 Archaeplastida
Zm00001e010932_P002 No alias No annotation 0.03 Archaeplastida
Zm00001e035810_P001 No alias subunit F of V-type ATPase peripheral V1 subcomplex 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0034220 ion transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005853 eukaryotic translation elongation factor 1 complex IEP Neighborhood
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR008218 ATPase_V1-cplx_f_g_su 15 115
No external refs found!