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  5. GSVIVT01015548001

GSVIVT01015548001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.F-BOX substrate adaptor components.EBF component


Gene families : OG0002999 (Archaeplastida) Phylogenetic Tree(s): OG0002999_tree ,
OG_05_0002473 (LandPlants) Phylogenetic Tree(s): OG_05_0002473_tree ,
OG_06_0002450 (SeedPlants) Phylogenetic Tree(s): OG_06_0002450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015548001
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00046140 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os02g10700.1 No alias EBF-type ethylene signal transducer. component EBF of... 0.07 Archaeplastida
LOC_Os06g40360.1 No alias EBF-type ethylene signal transducer. component EBF of... 0.04 Archaeplastida
Solyc12g009560.2.1 No alias EBF-type ethylene signal transducer. component EBF of... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 68 109
IPR001611 Leu-rich_rpt 194 217
IPR001611 Leu-rich_rpt 462 483
No external refs found!