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  5. GSVIVT01015649001

GSVIVT01015649001


No description available


Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0004419 (LandPlants) Phylogenetic Tree(s): OG_05_0004419_tree ,
OG_06_0002756 (SeedPlants) Phylogenetic Tree(s): OG_06_0002756_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015649001
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00266470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
AMTR_s00013p00120040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AMTR_s00071p00198520 evm_27.TU.AmTr_v1... Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00071p00198970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.04 Archaeplastida
AMTR_s00089p00081270 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AMTR_s00109p00015260 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AT1G69120 AGL7, AP1 K-box region and MADS-box transcription factor family protein 0.04 Archaeplastida
AT3G02310 AGL4, SEP2 K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
AT3G58780 AGL1, SHP1 K-box region and MADS-box transcription factor family protein 0.06 Archaeplastida
AT5G23260 AGL32, TT16, ABS K-box region and MADS-box transcription factor family protein 0.04 Archaeplastida
AT5G60440 AGL62 AGAMOUS-like 62 0.04 Archaeplastida
GSVIVT01008140001 No alias RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
GSVIVT01018839001 No alias Floral homeotic protein DEFICIENS OS=Antirrhinum majus 0.03 Archaeplastida
LOC_Os01g66290.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
LOC_Os06g06750.1 No alias transcription factor (MADS/AGL) 0.08 Archaeplastida
LOC_Os06g23980.1 No alias MADS-box transcription factor 27 OS=Oryza sativa subsp.... 0.03 Archaeplastida
LOC_Os08g38590.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_16629g0010 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_9841429g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Mp4g12490.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Pp3c12_22500V3.1 No alias K-box region and MADS-box transcription factor family protein 0.03 Archaeplastida
Pp3c17_24040V3.1 No alias AGAMOUS-like 66 0.02 Archaeplastida
Solyc02g065730.2.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc02g071730.4.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Solyc05g015750.3.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Solyc06g064840.4.1 No alias no description available(sp|f6i457|ag11c_vitvi : 172.0) 0.03 Archaeplastida
Solyc08g080100.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g044965.1.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e003670_P002 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e005708_P002 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e026007_P004 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e027031_P001 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Zm00001e029170_P001 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Zm00001e030373_P001 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e031267_P003 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!