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Description : Cell wall.pectin.homogalacturonan.modification and degradation.pectin methylesterase
Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0000108 (LandPlants) Phylogenetic Tree(s): OG_05_0000108_tree ,
OG_06_0004417 (SeedPlants) Phylogenetic Tree(s): OG_06_0004417_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01015852001 | |
| Cluster | HCCA: Cluster_64 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00027p00247950 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
| AMTR_s00056p00166920 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
| AMTR_s00106p00092510 | evm_27.TU.AmTr_v1... | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
| AMTR_s00116p00025230 | evm_27.TU.AmTr_v1... | Probable pectinesterase 8 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| AT1G05310 | No alias | Pectin lyase-like superfamily protein | 0.06 | Archaeplastida | |
| AT2G21610 | ATPE11, PE11 | pectinesterase 11 | 0.04 | Archaeplastida | |
| AT2G36710 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| AT3G24130 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| AT3G29090 | PME31, ATPME31 | pectin methylesterase 31 | 0.03 | Archaeplastida | |
| AT5G19730 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| AT5G47500 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| GSVIVT01015290001 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.03 | Archaeplastida | |
| Gb_17798 | No alias | pectin methylesterase | 0.05 | Archaeplastida | |
| Gb_27225 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
| Gb_32012 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
| LOC_Os01g53990.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
| MA_14449g0010 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
| MA_19196g0010 | No alias | pectin methylesterase | 0.02 | Archaeplastida | |
| Mp5g03920.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
| Mp5g03930.1 | No alias | pectin methylesterase | 0.04 | Archaeplastida | |
| Pp3c10_18650V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c16_19430V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c18_13190V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c19_8330V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c1_22810V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c25_3840V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c25_760V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c3_30560V3.1 | No alias | Pectin lyase-like superfamily protein | 0.05 | Archaeplastida | |
| Pp3c3_32350V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c3_35240V3.1 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| Pp3c5_12820V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c8_1440V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c8_2010V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c8_460V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Smo165098 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
| Smo81583 | No alias | Cell wall.pectin.homogalacturonan.modification and... | 0.04 | Archaeplastida | |
| Solyc08g078640.3.1 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Solyc12g098340.2.1 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Zm00001e027944_P002 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Zm00001e032213_P001 | No alias | pectin methylesterase | 0.03 | Archaeplastida | |
| Zm00001e033546_P001 | No alias | pectin methylesterase | 0.06 | Archaeplastida | |
| Zm00001e035522_P001 | No alias | pectin methylesterase | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0030599 | pectinesterase activity | IEA | Interproscan |
| BP | GO:0042545 | cell wall modification | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0008234 | cysteine-type peptidase activity | IEP | Neighborhood |
| BP | GO:0009116 | nucleoside metabolic process | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| BP | GO:1901657 | glycosyl compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000070 | Pectinesterase_cat | 98 | 389 |
| No external refs found! |