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  5. GSVIVT01015979001

GSVIVT01015979001


Description : Lamin-like protein OS=Arabidopsis thaliana


Gene families : OG0000039 (Archaeplastida) Phylogenetic Tree(s): OG0000039_tree ,
OG_05_0002592 (LandPlants) Phylogenetic Tree(s): OG_05_0002592_tree ,
OG_06_0001867 (SeedPlants) Phylogenetic Tree(s): OG_06_0001867_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01015979001
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00136250 evm_27.TU.AmTr_v1... Chemocyanin OS=Lilium longiflorum 0.03 Archaeplastida
AMTR_s00013p00238100 evm_27.TU.AmTr_v1... Uclacyanin 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT4G12880 AtENODL19, ENODL19 early nodulin-like protein 19 0.03 Archaeplastida
AT5G07475 No alias Cupredoxin superfamily protein 0.03 Archaeplastida
Cre02.g111900 No alias No description available 0.01 Archaeplastida
Gb_29072 No alias Mavicyanin OS=Cucurbita pepo (sp|p80728|mavi_cucpe : 112.0) 0.02 Archaeplastida
LOC_Os01g57690.1 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os03g50140.1 No alias Basic blue protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g55120.1 No alias Lamin-like protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g59280.1 No alias Mavicyanin OS=Cucurbita pepo (sp|p80728|mavi_cucpe : 112.0) 0.03 Archaeplastida
LOC_Os04g46120.1 No alias Uclacyanin-3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os04g46130.1 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os06g11490.1 No alias Blue copper protein OS=Pisum sativum (sp|q41001|bcp_pea : 128.0) 0.02 Archaeplastida
LOC_Os08g04310.1 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_93535g0010 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp2g14790.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp3g14010.1 No alias Stellacyanin OS=Toxicodendron vernicifluum... 0.03 Archaeplastida
Mp3g14680.1 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp6g07510.1 No alias Mavicyanin OS=Cucurbita pepo (sp|p80728|mavi_cucpe : 82.8) 0.02 Archaeplastida
Pp3c25_13010V3.1 No alias Cupredoxin superfamily protein 0.03 Archaeplastida
Pp3c3_25110V3.1 No alias Cupredoxin superfamily protein 0.03 Archaeplastida
Pp3c7_18880V3.1 No alias No annotation 0.02 Archaeplastida
Zm00001e005425_P001 No alias Basic blue protein OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e007359_P001 No alias Uclacyanin 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e011820_P001 No alias Mavicyanin OS=Cucurbita pepo (sp|p80728|mavi_cucpe : 110.0) 0.02 Archaeplastida
Zm00001e030822_P001 No alias Blue copper protein OS=Pisum sativum (sp|q41001|bcp_Pea : 124.0) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
CC GO:0017053 transcriptional repressor complex IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019211 phosphatase activator activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003245 Phytocyanin_dom 31 111
No external refs found!