GSVIVT01016062001


Description : Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG0001377 (Archaeplastida) Phylogenetic Tree(s): OG0001377_tree ,
OG_05_0006554 (LandPlants) Phylogenetic Tree(s): OG_05_0006554_tree ,
OG_06_0006946 (SeedPlants) Phylogenetic Tree(s): OG_06_0006946_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016062001
Cluster HCCA: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00255830 evm_27.TU.AmTr_v1... Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.04 Archaeplastida
AT1G73110 No alias P-loop containing nucleoside triphosphate hydrolases... 0.07 Archaeplastida
AT2G39730 RCA rubisco activase 0.11 Archaeplastida
Cpa|evm.model.tig00020848.91 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.04 Archaeplastida
Cre04.g229300 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.02 Archaeplastida
Gb_04109 No alias ATP-dependent activase involved in RuBisCo regulation 0.04 Archaeplastida
Gb_29248 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.03 Archaeplastida
Gb_37968 No alias ATP-dependent activase involved in RuBisCo regulation 0.09 Archaeplastida
LOC_Os04g56320.1 No alias Ribulose bisphosphate carboxylase/oxygenase activase 2,... 0.09 Archaeplastida
LOC_Os11g47970.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.04 Archaeplastida
MA_10428784g0010 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.04 Archaeplastida
MA_10433855g0010 No alias ATP-dependent activase involved in RuBisCo regulation 0.08 Archaeplastida
MA_379291g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp2g04090.1 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.09 Archaeplastida
Mp3g03990.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.06 Archaeplastida
Pp3c15_12410V3.1 No alias rubisco activase 0.09 Archaeplastida
Pp3c22_12960V3.1 No alias rubisco activase 0.03 Archaeplastida
Pp3c4_22100V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.07 Archaeplastida
Pp3c9_5310V3.1 No alias rubisco activase 0.07 Archaeplastida
Smo268623 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.04 Archaeplastida
Smo82367 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.04 Archaeplastida
Solyc03g117850.4.1 No alias Ribulose bisphosphate carboxylase/oxygenase activase,... 0.16 Archaeplastida
Solyc10g086580.2.1 No alias ATP-dependent activase involved in RuBisCo regulation 0.09 Archaeplastida
Zm00001e020928_P001 No alias ATP-dependent activase involved in RuBisCo regulation 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0001505 regulation of neurotransmitter levels IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004375 glycine dehydrogenase (decarboxylating) activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006536 glutamate metabolic process IEP Neighborhood
BP GO:0006537 glutamate biosynthetic process IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006544 glycine metabolic process IEP Neighborhood
BP GO:0006546 glycine catabolic process IEP Neighborhood
BP GO:0006553 lysine metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Neighborhood
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009063 cellular amino acid catabolic process IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009066 aspartate family amino acid metabolic process IEP Neighborhood
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009071 serine family amino acid catabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009085 lysine biosynthetic process IEP Neighborhood
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
CC GO:0009507 chloroplast IEP Neighborhood
CC GO:0009536 plastid IEP Neighborhood
BP GO:0010207 photosystem II assembly IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015930 glutamate synthase activity IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016642 oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
BP GO:0017144 drug metabolic process IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042133 neurotransmitter metabolic process IEP Neighborhood
BP GO:0042135 neurotransmitter catabolic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043648 dicarboxylic acid metabolic process IEP Neighborhood
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
MF GO:0046422 violaxanthin de-epoxidase activity IEP Neighborhood
BP GO:0046451 diaminopimelate metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901606 alpha-amino acid catabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 177 319
No external refs found!