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Description : Cell wall.pectin.modification and degradation.pectate lyase
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00014p00175040 | evm_27.TU.AmTr_v1... | Putative pectate lyase 2 OS=Arabidopsis thaliana | 0.06 | Archaeplastida | |
| AMTR_s00039p00186640 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| AMTR_s00039p00189000 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
| AMTR_s00120p00111300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
| AT1G11920 | No alias | Pectin lyase-like superfamily protein | 0.07 | Archaeplastida | |
| AT1G14420 | AT59 | Pectate lyase family protein | 0.01 | Archaeplastida | |
| AT2G02720 | No alias | Pectate lyase family protein | 0.01 | Archaeplastida | |
| AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.01 | Archaeplastida | |
| AT3G24670 | No alias | Pectin lyase-like superfamily protein | 0.01 | Archaeplastida | |
| AT3G27400 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
| AT4G13210 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| AT4G22080 | RHS14 | root hair specific 14 | 0.01 | Archaeplastida | |
| AT4G24780 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| AT5G15110 | No alias | Pectate lyase family protein | 0.01 | Archaeplastida | |
| AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.01 | Archaeplastida | |
| AT5G55720 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| GSVIVT01008053001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.01 | Archaeplastida | |
| GSVIVT01011348001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.01 | Archaeplastida | |
| GSVIVT01020067001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.01 | Archaeplastida | |
| GSVIVT01020068001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.01 | Archaeplastida | |
| GSVIVT01033671001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.07 | Archaeplastida | |
| Gb_02248 | No alias | pectate lyase | 0.04 | Archaeplastida | |
| LOC_Os04g05050.1 | No alias | pectate lyase | 0.01 | Archaeplastida | |
| LOC_Os10g31910.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_101171g0010 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_10353668g0010 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_10426822g0020 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_10430145g0030 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| MA_10437227g0010 | No alias | pectate lyase | 0.07 | Archaeplastida | |
| MA_203992g0010 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| MA_204440g0010 | No alias | Enzyme classification.EC_4 lyases.EC_4.2 carbon-oxygen... | 0.03 | Archaeplastida | |
| MA_66914g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
| Mp8g00770.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
| Pp3c10_20140V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
| Pp3c1_35100V3.1 | No alias | Pectin lyase-like superfamily protein | 0.01 | Archaeplastida | |
| Pp3c1_4040V3.1 | No alias | Pectin lyase-like superfamily protein | 0.07 | Archaeplastida | |
| Pp3c3_20320V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
| Pp3c3_35190V3.1 | No alias | Pectin lyase-like superfamily protein | 0.08 | Archaeplastida | |
| Solyc02g080910.4.1 | No alias | pectate lyase | 0.01 | Archaeplastida | |
| Solyc02g093580.4.1 | No alias | pectate lyase | 0.01 | Archaeplastida | |
| Solyc03g058890.4.1 | No alias | pectate lyase | 0.01 | Archaeplastida | |
| Solyc03g071570.3.1 | No alias | pectate lyase | 0.01 | Archaeplastida | |
| Solyc03g111690.4.1 | No alias | pectate lyase | 0.01 | Archaeplastida | |
| Solyc05g007080.4.1 | No alias | pectate lyase | 0.01 | Archaeplastida | |
| Solyc05g014000.4.1 | No alias | pectate lyase | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0009719 | response to endogenous stimulus | IEP | Neighborhood |
| BP | GO:0009725 | response to hormone | IEP | Neighborhood |
| BP | GO:0009733 | response to auxin | IEP | Neighborhood |
| BP | GO:0010033 | response to organic substance | IEP | Neighborhood |
| BP | GO:0042221 | response to chemical | IEP | Neighborhood |
| BP | GO:0050896 | response to stimulus | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002022 | Pec_lyase | 143 | 310 |
| No external refs found! |