1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01016274001

GSVIVT01016274001


Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL12 component


Gene families : OG0002167 (Archaeplastida) Phylogenetic Tree(s): OG0002167_tree ,
OG_05_0002069 (LandPlants) Phylogenetic Tree(s): OG_05_0002069_tree ,
OG_06_0002451 (SeedPlants) Phylogenetic Tree(s): OG_06_0002451_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016274001
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00105p00048810 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.05 Archaeplastida
AMTR_s00148p00026900 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
AT2G37190 No alias Ribosomal protein L11 family protein 0.04 Archaeplastida
AT3G53430 No alias Ribosomal protein L11 family protein 0.03 Archaeplastida
AT5G60670 No alias Ribosomal protein L11 family protein 0.08 Archaeplastida
Cpa|evm.model.tig00001339.27 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 Archaeplastida
Cre12.g528750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.06 Archaeplastida
LOC_Os02g47140.1 No alias component RPL12 of LSU proteome component 0.04 Archaeplastida
LOC_Os04g50990.1 No alias component RPL12 of LSU proteome component 0.04 Archaeplastida
MA_10427147g0010 No alias component RPL12 of LSU proteome component 0.06 Archaeplastida
Mp3g02020.1 No alias component RPL12 of LSU proteome component 0.04 Archaeplastida
Pp3c15_14410V3.1 No alias Ribosomal protein L11 family protein 0.05 Archaeplastida
Pp3c16_2860V3.1 No alias Ribosomal protein L11 family protein 0.06 Archaeplastida
Pp3c27_660V3.1 No alias Ribosomal protein L11 family protein 0.05 Archaeplastida
Pp3c6_19290V3.1 No alias Ribosomal protein L11 family protein 0.03 Archaeplastida
Pp3c9_15380V3.1 No alias Ribosomal protein L11 family protein 0.06 Archaeplastida
Smo227409 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 Archaeplastida
Solyc06g075180.1.1 No alias component RPL12 of LSU proteome component 0.04 Archaeplastida
Solyc11g065670.1.1 No alias component RPL12 of LSU proteome component 0.03 Archaeplastida
Solyc11g069440.1.1 No alias component RPL12 of LSU proteome component 0.06 Archaeplastida
Zm00001e007067_P001 No alias component RPL12 of LSU proteome component 0.07 Archaeplastida
Zm00001e008316_P001 No alias component RPL12 of LSU proteome component 0.07 Archaeplastida
Zm00001e023297_P001 No alias component RPL12 of LSU proteome component 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005789 endoplasmic reticulum membrane IEP Neighborhood
MF GO:0008375 acetylglucosaminyltransferase activity IEP Neighborhood
CC GO:0015934 large ribosomal subunit IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044391 ribosomal subunit IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR020783 Ribosomal_L11_C 72 141
No external refs found!