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  5. GSVIVT01016328001

GSVIVT01016328001


Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016328001
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00076p00127530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 Archaeplastida
AT1G16530 LBD3, ASL9 ASYMMETRIC LEAVES 2-like 9 0.03 Archaeplastida
AT2G30340 LBD13 LOB domain-containing protein 13 0.06 Archaeplastida
AT3G11090 LBD21 LOB domain-containing protein 21 0.07 Archaeplastida
GSVIVT01018486001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.06 Archaeplastida
Gb_03653 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Gb_07877 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Gb_20676 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os01g07480.2 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida
LOC_Os01g66590.2 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_66501g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Pp3c19_19610V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.01 Archaeplastida
Pp3c23_14630V3.1 No alias LOB domain-containing protein 13 0.02 Archaeplastida
Solyc06g050950.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g082430.2.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc12g010810.1.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Zm00001e016785_P005 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 12 109
No external refs found!