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  5. GSVIVT01016332001

GSVIVT01016332001


Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0000101 (Archaeplastida) Phylogenetic Tree(s): OG0000101_tree ,
OG_05_0000037 (LandPlants) Phylogenetic Tree(s): OG_05_0000037_tree ,
OG_06_0000043 (SeedPlants) Phylogenetic Tree(s): OG_06_0000043_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016332001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00169p00042500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 Archaeplastida
AT1G07900 LBD1 LOB domain-containing protein 1 0.04 Archaeplastida
AT1G16530 LBD3, ASL9 ASYMMETRIC LEAVES 2-like 9 0.03 Archaeplastida
AT2G30130 LBD12, ASL5, PCK1 Lateral organ boundaries (LOB) domain family protein 0.02 Archaeplastida
AT3G47870 LBD27, SCP LOB domain-containing protein 27 0.03 Archaeplastida
GSVIVT01016335001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 Archaeplastida
GSVIVT01024662001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
GSVIVT01032714001 No alias RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 Archaeplastida
Gb_20676 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Gb_38978 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
LOC_Os01g66590.2 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_16646g0010 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
MA_170661g0010 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_61242g0010 No alias transcription factor (AS2/LOB) 0.05 Archaeplastida
Mp7g17250.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Pp3c19_19400V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.04 Archaeplastida
Pp3c19_19610V3.1 No alias Lateral organ boundaries (LOB) domain family protein 0.01 Archaeplastida
Solyc01g044520.2.1 No alias transcription factor (AS2/LOB) 0.07 Archaeplastida
Solyc02g069440.3.1 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Solyc02g086480.1.1 No alias transcription factor (AS2/LOB) 0.03 Archaeplastida
Solyc03g095940.1.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Solyc06g050950.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
Zm00001e016785_P005 No alias transcription factor (AS2/LOB) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 41 138
No external refs found!