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  5. GSVIVT01016370001

GSVIVT01016370001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB-related transcription factor


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000498 (LandPlants) Phylogenetic Tree(s): OG_05_0000498_tree ,
OG_06_0000376 (SeedPlants) Phylogenetic Tree(s): OG_06_0000376_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016370001
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00040070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00045p00096080 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
AMTR_s00074p00097250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G49010 No alias Duplicated homeodomain-like superfamily protein 0.02 Archaeplastida
AT1G70000 No alias myb-like transcription factor family protein 0.03 Archaeplastida
AT1G74840 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G10590 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G36570 ATRL3, RL3 RAD-like 3 0.05 Archaeplastida
AT5G04760 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G05790 No alias Duplicated homeodomain-like superfamily protein 0.05 Archaeplastida
AT5G23650 No alias Homeodomain-like transcriptional regulator 0.03 Archaeplastida
AT5G56840 No alias myb-like transcription factor family protein 0.05 Archaeplastida
GSVIVT01009723001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
GSVIVT01014754001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016996001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01020132001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01036090001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_28483 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os01g04930.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os01g09640.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os01g63460.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os02g47744.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os03g62100.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
LOC_Os05g10690.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os05g37050.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os05g37060.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os05g50340.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
LOC_Os06g07640.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
LOC_Os08g04840.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_11322g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.04 Archaeplastida
MA_413315g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_41803g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_488767g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_6532729g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_7049680g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Pp3c4_5410V3.1 No alias myb-like transcription factor family protein 0.03 Archaeplastida
Solyc02g082390.1.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc03g113620.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Solyc04g008870.3.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Solyc04g080500.3.1 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Solyc05g052610.3.1 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Solyc07g026680.2.1 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Solyc09g014250.3.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Solyc12g008800.3.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e010716_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e016939_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.07 Archaeplastida
Zm00001e020633_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e025446_P001 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Zm00001e025783_P002 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Zm00001e025784_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e025946_P002 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e027520_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e027835_P005 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e028003_P001 No alias transcription factor (MYB-related) 0.01 Archaeplastida
Zm00001e028675_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e028729_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e031738_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e031755_P001 No alias transcription factor (MYB-related) 0.04 Archaeplastida
Zm00001e032519_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Zm00001e032520_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e040398_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e040399_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 72 116
No external refs found!