GSVIVT01016393001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000116 (LandPlants) Phylogenetic Tree(s): OG_05_0000116_tree ,
OG_06_0000157 (SeedPlants) Phylogenetic Tree(s): OG_06_0000157_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016393001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00272410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00049p00074250 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.01 Archaeplastida
AT1G69560 LOF2, MYB105, ATMYB105 myb domain protein 105 0.01 Archaeplastida
AT2G47190 MYB2, ATMYB2 myb domain protein 2 0.01 Archaeplastida
AT5G62320 ATMYB99, ATMYBCU15, MYB99 myb domain protein 99 0.01 Archaeplastida
AT5G62470 MYBCOV1, MYB96, ATMYB96 myb domain protein 96 0.01 Archaeplastida
Gb_17134 No alias Transcription factor MYB3R-1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_23187 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_24641 No alias transcription factor (MYB) 0.06 Archaeplastida
Gb_33428 No alias transcription factor (MYB) 0.01 Archaeplastida
Gb_39852 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os01g07450.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os01g59660.1 No alias transcription factor (MYB) 0.01 Archaeplastida
LOC_Os02g02370.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g51799.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os05g46610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.05 Archaeplastida
LOC_Os08g33940.1 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_10433651g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_114955g0020 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.03 Archaeplastida
MA_16413g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_2797g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_37256g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_79447g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_83918g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_93127g0010 No alias transcription factor (MYB) 0.01 Archaeplastida
MA_95012g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g24520.1 No alias component SNAPC4 of SNAP snRNA transcription factor... 0.02 Archaeplastida
Smo84369 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc02g086690.3.1 No alias transcription factor (MYB) 0.01 Archaeplastida
Solyc05g007690.2.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Solyc05g007710.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc05g048830.3.1 No alias transcription factor (MYB) 0.06 Archaeplastida
Zm00001e001399_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e004164_P002 No alias transcription factor (MYB) 0.01 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e022450_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e024037_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e024322_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e030961_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e039235_P001 No alias transcription factor (MYB) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000726 non-recombinational repair IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006302 double-strand break repair IEP Neighborhood
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 93 136
IPR001005 SANT/Myb 41 86
No external refs found!