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  5. GSVIVT01016468001

GSVIVT01016468001


Description : Uncharacterized protein At2g39795, mitochondrial OS=Arabidopsis thaliana


Gene families : OG0000745 (Archaeplastida) Phylogenetic Tree(s): OG0000745_tree ,
OG_05_0000781 (LandPlants) Phylogenetic Tree(s): OG_05_0000781_tree ,
OG_06_0001928 (SeedPlants) Phylogenetic Tree(s): OG_06_0001928_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016468001
Cluster HCCA: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00263410 evm_27.TU.AmTr_v1... Uncharacterized protein At2g39795, mitochondrial... 0.04 Archaeplastida
AT2G39795 No alias Mitochondrial glycoprotein family protein 0.05 Archaeplastida
AT3G55605 No alias Mitochondrial glycoprotein family protein 0.07 Archaeplastida
AT5G02050 No alias Mitochondrial glycoprotein family protein 0.13 Archaeplastida
Cre10.g447100 No alias No description available 0.02 Archaeplastida
Gb_30186 No alias Uncharacterized protein At2g39795, mitochondrial... 0.08 Archaeplastida
LOC_Os01g05010.1 No alias Uncharacterized protein At2g39795, mitochondrial... 0.09 Archaeplastida
LOC_Os06g22070.1 No alias Uncharacterized protein At2g39795, mitochondrial... 0.13 Archaeplastida
LOC_Os08g34130.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10427007g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_123491g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.19 Archaeplastida
MA_5294g0010 No alias Uncharacterized protein At2g39795, mitochondrial... 0.07 Archaeplastida
Mp1g21440.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c12_23320V3.1 No alias Mitochondrial glycoprotein family protein 0.07 Archaeplastida
Solyc03g079930.3.1 No alias Uncharacterized protein At2g39795, mitochondrial... 0.07 Archaeplastida
Solyc03g117080.4.1 No alias no hits & (original description: none) 0.13 Archaeplastida
Solyc06g065800.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e004097_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016932_P001 No alias Uncharacterized protein At2g39795, mitochondrial... 0.08 Archaeplastida
Zm00001e025796_P002 No alias Uncharacterized protein At2g39795, mitochondrial... 0.03 Archaeplastida
Zm00001e036951_P001 No alias Uncharacterized protein At2g39795, mitochondrial... 0.13 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005759 mitochondrial matrix IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003428 MAM33 73 251
No external refs found!