1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01016493001

GSVIVT01016493001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0000388 (SeedPlants) Phylogenetic Tree(s): OG_06_0000388_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016493001
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00086480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
AMTR_s00079p00109960 evm_27.TU.AmTr_v1... Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.04 Archaeplastida
AMTR_s00079p00169240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.07 Archaeplastida
AMTR_s00088p00145510 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
AMTR_s00124p00105750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G10480 ZFP5 zinc finger protein 5 0.07 Archaeplastida
AT1G13400 JGL, NUB C2H2 and C2HC zinc fingers superfamily protein 0.07 Archaeplastida
AT1G66140 ZFP4 zinc finger protein 4 0.04 Archaeplastida
AT1G67030 ZFP6 zinc finger protein 6 0.06 Archaeplastida
AT1G80730 ZFP1, ATZFP1 zinc-finger protein 1 0.05 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.09 Archaeplastida
AT3G23130 SUP, FLO10, FON1 C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT3G53820 No alias C2H2 and C2HC zinc fingers superfamily protein 0.06 Archaeplastida
AT5G06070 RAB, RBE C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
AT5G10970 No alias C2H2 and C2HC zinc fingers superfamily protein 0.05 Archaeplastida
AT5G14010 KNU C2H2 and C2HC zinc fingers superfamily protein 0.05 Archaeplastida
AT5G25160 ZFP3 zinc finger protein 3 0.09 Archaeplastida
AT5G43540 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
AT5G48890 No alias C2H2-like zinc finger protein 0.05 Archaeplastida
AT5G57520 ATZFP2, ZFP2 zinc finger protein 2 0.05 Archaeplastida
GSVIVT01011890001 No alias Zinc finger protein STAMENLESS 1 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
GSVIVT01013168001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01020155001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01025803001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01028555001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Gb_04808 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_12546 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Gb_26860 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os01g32920.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
LOC_Os02g01090.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os03g57240.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os05g20930.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
LOC_Os07g23450.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os08g44190.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os09g26200.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os09g26210.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os09g27320.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
LOC_Os09g38610.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os11g48000.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_10430024g0010 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
MA_107283g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_121523g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_2800g0010 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
MA_357706g0010 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
MA_424g0010 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_57615g0010 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Pp3c1_8210V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c20_10790V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
Pp3c23_2190V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
Pp3c23_800V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.04 Archaeplastida
Pp3c23_960V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Pp3c26_13140V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Pp3c6_19230V3.1 No alias C2H2 and C2HC zinc fingers superfamily protein 0.03 Archaeplastida
Solyc03g117070.1.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc05g006310.3.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Solyc05g009180.1.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
Solyc06g053720.3.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc09g011120.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc09g066250.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc09g089590.1.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Solyc10g078970.1.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Solyc10g078990.1.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Solyc10g084910.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc11g011890.2.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e009853_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e009854_P001 No alias C2H2 zinc finger transcription factor 0.1 Archaeplastida
Zm00001e010687_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e011910_P001 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Zm00001e016256_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e020926_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e022212_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e023775_P002 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e032639_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e034293_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e034883_P001 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Zm00001e035448_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e036816_P001 No alias C2H2 zinc finger transcription factor 0.12 Archaeplastida
Zm00001e037946_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e040612_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e040940_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008146 sulfotransferase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016790 thiolester hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!