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  5. GSVIVT01016520001

GSVIVT01016520001


Description : RNA biosynthesis.transcriptional activation.GRAS transcription factor


Gene families : OG0001039 (Archaeplastida) Phylogenetic Tree(s): OG0001039_tree ,
OG_05_0000632 (LandPlants) Phylogenetic Tree(s): OG_05_0000632_tree ,
OG_06_0000991 (SeedPlants) Phylogenetic Tree(s): OG_06_0000991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016520001
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AT2G29060 No alias GRAS family transcription factor 0.03 Archaeplastida
AT5G59450 No alias GRAS family transcription factor 0.03 Archaeplastida
MA_45656g0030 No alias transcription factor (GRAS) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
CC GO:0019008 molybdopterin synthase complex IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 199 240
IPR005202 TF_GRAS 245 436
IPR005202 TF_GRAS 117 196
No external refs found!