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  5. GSVIVT01016521001

GSVIVT01016521001


Description : RNA biosynthesis.transcriptional activation.GRAS transcription factor


Gene families : OG0001039 (Archaeplastida) Phylogenetic Tree(s): OG0001039_tree ,
OG_05_0000632 (LandPlants) Phylogenetic Tree(s): OG_05_0000632_tree ,
OG_06_0000991 (SeedPlants) Phylogenetic Tree(s): OG_06_0000991_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016521001
Cluster HCCA: Cluster_184

Target Alias Description ECC score Gene Family Method Actions
AT5G59450 No alias GRAS family transcription factor 0.06 Archaeplastida
LOC_Os11g47900.1 No alias transcription factor (GRAS) 0.06 Archaeplastida
MA_45656g0030 No alias transcription factor (GRAS) 0.05 Archaeplastida
Pp3c17_13550V3.1 No alias SCARECROW-like 14 0.04 Archaeplastida
Solyc06g076280.3.1 No alias transcription factor (GRAS) 0.03 Archaeplastida
Solyc09g010920.1.1 No alias transcription factor (GRAS) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006308 DNA catabolic process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR005202 TF_GRAS 364 410
IPR005202 TF_GRAS 291 358
No external refs found!