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  5. AMTR_s00039p00166770

AMTR_s00039p00166770 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.123

Description : Membrane protein PM19L OS=Oryza sativa subsp. japonica


Gene families : OG0000550 (Archaeplastida) Phylogenetic Tree(s): OG0000550_tree ,
OG_05_0000510 (LandPlants) Phylogenetic Tree(s): OG_05_0000510_tree ,
OG_06_0010184 (SeedPlants) Phylogenetic Tree(s): OG_06_0010184_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00166770
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AT1G29520 No alias AWPM-19-like family protein 0.03 Archaeplastida
AT5G18970 No alias AWPM-19-like family protein 0.04 Archaeplastida
AT5G46530 No alias AWPM-19-like family protein 0.04 Archaeplastida
GSVIVT01017867001 No alias No description available 0.02 Archaeplastida
GSVIVT01031072001 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Gb_35411 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os01g14530.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10157399g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10428014g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_199g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_470613g0020 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c11_14870V3.1 No alias AWPM-19-like family protein 0.02 Archaeplastida
Pp3c20_13220V3.1 No alias AWPM-19-like family protein 0.02 Archaeplastida
Smo37585 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Smo432371 No alias No description available 0.02 Archaeplastida
Smo437726 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Solyc01g080290.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc02g071310.3.1 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e020052_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026824_P001 No alias Membrane protein PM19L OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Zm00001e028127_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR008390 AWPM-19 15 143
No external refs found!