GSVIVT01016538001

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01016538001
Cluster	HCCA: Cluster_136

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00264070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00030p00153440	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
AMTR_s00058p00210070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AMTR_s00059p00213350	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.06	Archaeplastida
AMTR_s00080p00087770	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AMTR_s00119p00099150	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.02	Archaeplastida
AMTR_s00160p00046100	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.05	Archaeplastida
AMTR_s00169p00055880	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AT1G07640	OBP2	Dof-type zinc finger DNA-binding family protein	0.07	Archaeplastida
AT1G51700	ADOF1, DOF1	DOF zinc finger protein 1	0.02	Archaeplastida
AT2G28810	No alias	Dof-type zinc finger DNA-binding family protein	0.06	Archaeplastida
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT2G37590	DOF2.4, ATDOF2.4	DNA binding with one finger 2.4	0.03	Archaeplastida
AT3G55370	OBP3	OBF-binding protein 3	0.06	Archaeplastida
AT3G61850	DAG1	Dof-type zinc finger DNA-binding family protein	0.04	Archaeplastida
AT4G00940	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT4G38000	DOF4.7	DNA binding with one finger 4.7	0.03	Archaeplastida
AT5G60850	OBP4	OBF binding protein 4	0.01	Archaeplastida
AT5G62940	HCA2, DOF5.6	Dof-type zinc finger DNA-binding family protein	0.06	Archaeplastida
GSVIVT01011138001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.05	Archaeplastida
GSVIVT01024986001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
Gb_12877	No alias	transcription factor (DOF)	0.05	Archaeplastida
Gb_20144	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os01g15900.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os01g64590.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os02g15350.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os03g07360.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os03g16850.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os03g38870.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os03g55610.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os03g60630.1	No alias	transcription factor (DOF)	0.09	Archaeplastida
LOC_Os04g47990.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os05g02150.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
LOC_Os07g13260.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os07g32510.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
LOC_Os12g38200.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_16692g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_459791g0010	No alias	transcription factor (DOF)	0.04	Archaeplastida
MA_46520g0010	No alias	transcription factor (DOF)	0.02	Archaeplastida
MA_56828g0010	No alias	transcription factor (DOF)	0.05	Archaeplastida
MA_939289g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
Mp1g18540.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Mp2g20790.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Pp3c13_2000V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Pp3c13_21190V3.1	No alias	cycling DOF factor 3	0.02	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.04	Archaeplastida
Solyc02g076850.2.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc02g077950.3.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
Solyc02g078620.1.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Solyc02g090310.1.1	No alias	transcription factor (DOF)	0.01	Archaeplastida
Solyc03g112930.3.1	No alias	transcription factor (DOF)	0.13	Archaeplastida
Solyc03g121400.1.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc06g062520.1.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc06g069760.3.1	No alias	transcription factor (DOF)	0.01	Archaeplastida
Solyc06g071480.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc06g076030.3.1	No alias	transcription factor (DOF)	0.07	Archaeplastida
Solyc08g082910.2.1	No alias	transcription factor (DOF)	0.08	Archaeplastida
Solyc09g010680.3.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
Solyc10g086440.2.1	No alias	transcription factor (DOF)	0.06	Archaeplastida
Solyc11g066050.1.1	No alias	transcription factor (DOF)	0.08	Archaeplastida
Solyc11g072500.2.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e000526_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e002951_P002	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e005107_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e006190_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e007228_P002	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e010454_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e011750_P002	No alias	transcription factor (DOF)	0.07	Archaeplastida
Zm00001e015414_P004	No alias	transcription factor (DOF)	0.07	Archaeplastida
Zm00001e015597_P001	No alias	transcription factor (DOF)	0.06	Archaeplastida
Zm00001e018163_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e019172_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e023218_P004	No alias	transcription factor (DOF)	0.09	Archaeplastida
Zm00001e023334_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e027634_P002	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e029641_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e035074_P001	No alias	transcription factor (DOF)	0.07	Archaeplastida
Zm00001e041444_P001	No alias	transcription factor (DOF)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004435	phosphatidylinositol phospholipase C activity	IEP	Neighborhood
MF	GO:0004620	phospholipase activity	IEP	Neighborhood
MF	GO:0004629	phospholipase C activity	IEP	Neighborhood
MF	GO:0004672	protein kinase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005216	ion channel activity	IEP	Neighborhood
MF	GO:0005319	lipid transporter activity	IEP	Neighborhood
BP	GO:0005985	sucrose metabolic process	IEP	Neighborhood
BP	GO:0006464	cellular protein modification process	IEP	Neighborhood
BP	GO:0006468	protein phosphorylation	IEP	Neighborhood
BP	GO:0006793	phosphorus metabolic process	IEP	Neighborhood
BP	GO:0006796	phosphate-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006869	lipid transport	IEP	Neighborhood
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Neighborhood
BP	GO:0008152	metabolic process	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015267	channel activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
CC	GO:0016020	membrane	IEP	Neighborhood
MF	GO:0016157	sucrose synthase activity	IEP	Neighborhood
MF	GO:0016298	lipase activity	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
BP	GO:0016310	phosphorylation	IEP	Neighborhood
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Neighborhood
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	Neighborhood
MF	GO:0022803	passive transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022838	substrate-specific channel activity	IEP	Neighborhood
BP	GO:0035556	intracellular signal transduction	IEP	Neighborhood
BP	GO:0036211	protein modification process	IEP	Neighborhood
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	Neighborhood
BP	GO:0043412	macromolecule modification	IEP	Neighborhood
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Neighborhood
BP	GO:0061024	membrane organization	IEP	Neighborhood
BP	GO:0120009	intermembrane lipid transfer	IEP	Neighborhood
MF	GO:0120013	intermembrane lipid transfer activity	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	74	130

External Links

No external refs found!

GSVIVT01016538001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation