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  5. GSVIVT01016596001

GSVIVT01016596001


Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase activities.E-class RAB GTPase


Gene families : OG0000982 (Archaeplastida) Phylogenetic Tree(s): OG0000982_tree ,
OG_05_0000891 (LandPlants) Phylogenetic Tree(s): OG_05_0000891_tree ,
OG_06_0000914 (SeedPlants) Phylogenetic Tree(s): OG_06_0000914_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016596001
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
AT5G59840 No alias Ras-related small GTP-binding family protein 0.04 Archaeplastida
Cpa|evm.model.tig00000983.30 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
Cre15.g641800 No alias GTP-binding protein yptV2 OS=Volvox carteri 0.03 Archaeplastida
LOC_Os03g60530.1 No alias E-class RAB GTPase 0.06 Archaeplastida
LOC_Os05g38630.2 No alias E-class RAB GTPase 0.06 Archaeplastida
LOC_Os07g09680.1 No alias E-class RAB GTPase 0.03 Archaeplastida
LOC_Os07g13530.1 No alias E-class RAB GTPase 0.05 Archaeplastida
MA_10433537g0020 No alias Ras-related protein RABE1d OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_9015061g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c16_17460V3.1 No alias RAB GTPase homolog 8A 0.02 Archaeplastida
Zm00001e006180_P001 No alias E-class RAB GTPase 0.03 Archaeplastida
Zm00001e033170_P001 No alias E-class RAB GTPase 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Neighborhood
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0030014 CCR4-NOT complex IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Neighborhood
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Neighborhood
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 17 178
No external refs found!