GSVIVT01016670001


Description : Protein degradation.26S proteasome.20S core protease.alpha-type subunits.alpha type-5 component


Gene families : OG0003908 (Archaeplastida) Phylogenetic Tree(s): OG0003908_tree ,
OG_05_0004215 (LandPlants) Phylogenetic Tree(s): OG_05_0004215_tree ,
OG_06_0006205 (SeedPlants) Phylogenetic Tree(s): OG_06_0006205_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016670001
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT1G53850 ATPAE1, PAE1 20S proteasome alpha subunit E1 0.08 Archaeplastida
Cpa|evm.model.tig00000692.64 No alias Proteasome subunit alpha type-5 OS=Oryza sativa subsp. japonica 0.01 Archaeplastida
Cre17.g724350 No alias Protein degradation.26S proteasome.20S core... 0.07 Archaeplastida
Gb_15656 No alias component alpha type-5 of 26S proteasome 0.03 Archaeplastida
LOC_Os11g40140.1 No alias component alpha type-5 of 26S proteasome 0.03 Archaeplastida
Mp4g02150.1 No alias component alpha type-5 of 26S proteasome 0.09 Archaeplastida
Pp3c14_23290V3.1 No alias 20S proteasome alpha subunit E2 0.05 Archaeplastida
Pp3c17_20640V3.1 No alias 20S proteasome alpha subunit E2 0.03 Archaeplastida
Smo267349 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
Solyc02g070510.3.1 No alias component alpha type-5 of 26S proteasome 0.1 Archaeplastida
Solyc08g016510.3.1 No alias component alpha type-5 of 26S proteasome 0.05 Archaeplastida
Zm00001e000401_P001 No alias component alpha type-5 of 26S proteasome 0.1 Archaeplastida
Zm00001e038983_P001 No alias component alpha type-5 of 26S proteasome 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
CC GO:0019773 proteasome core complex, alpha-subunit complex IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006672 ceramide metabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
BP GO:0048229 gametophyte development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 87 274
IPR000426 Proteasome_asu_N 64 86
No external refs found!