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  5. GSVIVT01016721001

GSVIVT01016721001


Description : RNA biosynthesis.transcriptional activation.TIFY transcription factor


Gene families : OG0000437 (Archaeplastida) Phylogenetic Tree(s): OG0000437_tree ,
OG_05_0000221 (LandPlants) Phylogenetic Tree(s): OG_05_0000221_tree ,
OG_06_0000753 (SeedPlants) Phylogenetic Tree(s): OG_06_0000753_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016721001
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00130370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TIFY... 0.05 Archaeplastida
AMTR_s00131p00119200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TIFY... 0.04 Archaeplastida
AT1G17380 TIFY11A, JAZ5 jasmonate-zim-domain protein 5 0.05 Archaeplastida
Gb_19069 No alias transcription factor (TIFY) 0.03 Archaeplastida
LOC_Os03g08320.1 No alias transcription factor (TIFY) 0.08 Archaeplastida
LOC_Os03g08330.1 No alias transcription factor (TIFY) 0.06 Archaeplastida
LOC_Os07g42370.1 No alias component JAZ of jasmonic acid receptor complex.... 0.03 Archaeplastida
LOC_Os09g26780.1 No alias transcription factor (TIFY) 0.04 Archaeplastida
LOC_Os10g25290.1 No alias transcription factor (TIFY) 0.05 Archaeplastida
MA_10229741g0010 No alias transcription factor (TIFY) 0.03 Archaeplastida
MA_10426545g0010 No alias transcription factor (TIFY) 0.04 Archaeplastida
MA_10426545g0020 No alias transcription factor (TIFY) 0.04 Archaeplastida
MA_1854g0020 No alias transcription factor (TIFY) 0.02 Archaeplastida
MA_19887g0010 No alias transcription factor (TIFY) 0.02 Archaeplastida
MA_68496g0010 No alias transcription factor (TIFY) 0.02 Archaeplastida
Mp6g06230.1 No alias transcription factor (TIFY) 0.02 Archaeplastida
Pp3c25_6330V3.1 No alias jasmonate-zim-domain protein 3 0.02 Archaeplastida
Solyc03g122190.3.1 No alias transcription factor (TIFY) 0.06 Archaeplastida
Solyc06g068930.2.1 No alias transcription factor (TIFY) 0.03 Archaeplastida
Solyc07g042170.3.1 No alias component JAZ of jasmonic acid receptor complex.... 0.03 Archaeplastida
Solyc12g009220.2.1 No alias component JAZ of jasmonic acid receptor complex.... 0.03 Archaeplastida
Zm00001e000589_P001 No alias transcription factor (TIFY) 0.04 Archaeplastida
Zm00001e000590_P001 No alias transcription factor (TIFY) 0.07 Archaeplastida
Zm00001e001934_P001 No alias component JAZ of jasmonic acid receptor complex.... 0.03 Archaeplastida
Zm00001e004861_P001 No alias transcription factor (TIFY) 0.04 Archaeplastida
Zm00001e004862_P001 No alias transcription factor (TIFY) 0.06 Archaeplastida
Zm00001e012856_P001 No alias transcription factor (TIFY) 0.04 Archaeplastida
Zm00001e034256_P001 No alias transcription factor (TIFY) 0.03 Archaeplastida
Zm00001e035549_P001 No alias component JAZ of jasmonic acid receptor complex.... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0007186 G-protein coupled receptor signaling pathway IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0015696 ammonium transport IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018467 CCT_CS 180 205
IPR010399 Tify_dom 78 110
No external refs found!