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  5. AMTR_s00039p00177200

AMTR_s00039p00177200 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00039.142

Description : Protein biosynthesis.translation initiation.pre-initiation complex (PIC).eIF2 Met-tRNA binding factor complex.phosphorylation of eIF2-alpha.GCN1 kinase co-activator (ILITHYIA)


Gene families : OG0002808 (Archaeplastida) Phylogenetic Tree(s): OG0002808_tree ,
OG_05_0003459 (LandPlants) Phylogenetic Tree(s): OG_05_0003459_tree ,
OG_06_0003300 (SeedPlants) Phylogenetic Tree(s): OG_06_0003300_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00039p00177200
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT1G64790 ILA ILITYHIA 0.03 Archaeplastida
GSVIVT01026340001 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
MA_10358253g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10426840g0010 No alias Protein ILITYHIA OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10426840g0020 No alias Protein ILITYHIA OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_177837g0010 No alias Protein ILITYHIA OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_257568g0010 No alias eIF2-alpha kinase co-activator (ILITHYIA/GCN1) 0.04 Archaeplastida
MA_380907g0010 No alias Protein ILITYHIA OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_50461g0010 No alias Protein ILITYHIA OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_50461g0020 No alias eIF2-alpha kinase co-activator (ILITHYIA/GCN1) 0.02 Archaeplastida
Pp3c22_8910V3.1 No alias ILITYHIA 0.02 Archaeplastida
Smo230367 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
Solyc04g050510.3.1 No alias eIF2-alpha kinase co-activator (ILITHYIA/GCN1) 0.03 Archaeplastida
Zm00001e005508_P002 No alias eIF2-alpha kinase co-activator (ILITHYIA/GCN1) 0.02 Archaeplastida
Zm00001e025241_P001 No alias Protein ILITYHIA OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004525 ribonuclease III activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004814 arginine-tRNA ligase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006420 arginyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007031 peroxisome organization IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000357 HEAT 1031 1060
No external refs found!