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  5. GSVIVT01016816001

GSVIVT01016816001


Description : Protein modification.dephosphorylation.serine/threonine protein phosphatase superfamily.PPM/PP2C Mn/Mg-dependent phosphatase families.clade A phosphatase


Gene families : OG0000427 (Archaeplastida) Phylogenetic Tree(s): OG0000427_tree ,
OG_05_0000300 (LandPlants) Phylogenetic Tree(s): OG_05_0000300_tree ,
OG_06_0001098 (SeedPlants) Phylogenetic Tree(s): OG_06_0001098_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01016816001
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT1G17550 HAB2 homology to ABI2 0.03 Archaeplastida
Cre03.g211073 No alias Protein modification.dephosphorylation.serine/threonine... 0.02 Archaeplastida
Solyc12g096020.3.1 No alias regulatory phosphatase component of cytoplasm-localized... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0017150 tRNA dihydrouridine synthase activity IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 220 488
No external refs found!